Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2387 |
Symbol | |
ID | 5198724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2650635 |
End bp | 2651996 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640581933 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_001262884 |
Protein GI | 148555302 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.844507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCGCG GCATGTCGCG CCCTGCCCCC AAGAGCTTCC ACGTCAAGTC GTTCGGCTGC CAGATGAACG TCTATGACGG CGCGCGCATG GCCGAGCTGC TCGAAGCGCA GGGCATGCAC GCCGCCGACA GCGCCGACGC CGCCGACCTG GTCGTGCTCA ACACCTGCCA CATCCGCGAG AAGGCGGCCG AGAAGGTCTA TTCGGACATC GGCCGGATCG TGAAGAAGGC CGCCGACGCC GAGGAGGGCC GGGCGCGGCC GATGATCGCC GTCGCCGGCT GCGTCGCCCA GGCCGAAGGG CCCGAGATTC CACGCCGCGC CCCCGCAGTC GACATCGTCG TCGGGCCACA GGCCTATCAC AACCTGCCCC AGCTCGTCGC CGACGCCGCC GAGGGCCGCC GCGCGCTCGA CACCGACATG CCCGCCGCGT CGAAGTTCGA CACGCTGCCG AAGCGCCGCC GCCAGGGGCC GACCGCCTTC CTGACCGTGC AGGAGGGCTG CGACAAATTC TGCACCTATT GCGTCGTCCC CTATACGCGC GGGGCGGAAA TCTCGCGGCC GTGGGGCGCG ATCGTCGACG AGGCGAAGGC GCTGGTCGAC GCCGGCGCGC GCGAGATCAC CCTGCTCGGC CAGAACGTCA ACGCCTGGAC CGGCGAGGAC GATCGCGGCC GGACGCAAGG CCTCGACGGG CTGATCCGCG CGCTCGACGC GCTGCCCGGC CTCGCCCGCA TCCGCTACAC CACCAGCCAC CCCAACGACA TGAGCGACGG CCTGATCGCC GCGCATGGCG AGGTGGCGAA GCTGATGCCC TTCCTCCATC TGCCGGTGCA GGCGGGATCG GATCGCATCC TCAAGGCGAT GAACCGCAGC CACGACGCCG CCGGCTATCT GCGCCTGATC GAGCGGGTCC GCGCGGCGCG GCCCGACATC GCGGTCTCGG GCGACTTCAT CGTCGGCTTC CCCGGCGAGA CCGACGAGGA TTTCGAGGCG ACCCTCGCCA TCGTCCGCGC GGTCGACCAC GCCCAGGCGT TCAGCTTCAA ATACAGCCCC CGCCCCGGCA CCCCCGCCGC GTCGATGGAC GGCCAGGTCG CACCGGCGGT GATGGACGAG CGGCTGCAAC GGCTCCAGGC GCTGCTCAAC GAGCAGCAGC ACCGCTTCAA CCTGGCGACG GTCGGCAAGC GCTGCGAGGT GCTGATCGAG CGCGACGGCA AGAAGCCCGG CCAGCGGATC GGCAAGTCGC CCTGGCTCCA GTCGGTGATC GTCGAGGACG GCCCGGCGAT CGGCACGCTG GTGACGGTCG ACATCGTCTC GGCCGGACCG AACAGCCTGA GCGGCGCCCT GGTCGAACAA AAGGCCGCCT GA
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Protein sequence | MGRGMSRPAP KSFHVKSFGC QMNVYDGARM AELLEAQGMH AADSADAADL VVLNTCHIRE KAAEKVYSDI GRIVKKAADA EEGRARPMIA VAGCVAQAEG PEIPRRAPAV DIVVGPQAYH NLPQLVADAA EGRRALDTDM PAASKFDTLP KRRRQGPTAF LTVQEGCDKF CTYCVVPYTR GAEISRPWGA IVDEAKALVD AGAREITLLG QNVNAWTGED DRGRTQGLDG LIRALDALPG LARIRYTTSH PNDMSDGLIA AHGEVAKLMP FLHLPVQAGS DRILKAMNRS HDAAGYLRLI ERVRAARPDI AVSGDFIVGF PGETDEDFEA TLAIVRAVDH AQAFSFKYSP RPGTPAASMD GQVAPAVMDE RLQRLQALLN EQQHRFNLAT VGKRCEVLIE RDGKKPGQRI GKSPWLQSVI VEDGPAIGTL VTVDIVSAGP NSLSGALVEQ KAA
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