Gene Swit_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2385 
Symbol 
ID5198049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2649447 
End bp2649869 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content65% 
IMG OID640581931 
Productferric uptake regulator family protein 
Protein accessionYP_001262882 
Protein GI148555300 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.978745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGCA AGATCGACAT CGAACAGCTC TGCGCGGACA AGGGTCTGCG CATCACCGAA 
CAGCGGCGCG TCATCGCCCG CGTTCTTTCC GACGCCGATG ATCATCCCGA CGTCGAGTTG
CTCCACCAGC GCGCCGCCGC GATCGATCCG GGCATCTCGA TCGCGACGGT CTATCGCACC
GTCCGCCTGT TCGAGGATGC CGGCATCCTG GAGCGCCATG ATTTCGGCGA CGGCCGCGCC
CGTTACGAGG CGGCACCCGA AACCCATCAC GATCATCTGA TCAACGTCGA GACCGGCGAG
GTGATCGAGT TCGTCGACGG CGAGCTCGAG GAGCTGCAGC GCCGCATCGC CGAGAAGCTG
GGCTTCCGCC TGGTCGACCA CCGGCTCGAA CTCTACGGCG TTTCGGCCAA CCGAACGAAA
TAA
 
Protein sequence
MPGKIDIEQL CADKGLRITE QRRVIARVLS DADDHPDVEL LHQRAAAIDP GISIATVYRT 
VRLFEDAGIL ERHDFGDGRA RYEAAPETHH DHLINVETGE VIEFVDGELE ELQRRIAEKL
GFRLVDHRLE LYGVSANRTK