| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2321 |
|---|
| Symbol | |
|---|
| ID | 5199786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2581365 |
|---|
| End bp | 2582705 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640581867 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001262818 |
|---|
| Protein GI | 148555236 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.638143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0384275 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCG CCAGCGCCAT GCCGCACCCT GTTCCCCTGG CCCCCTTTCC CTGGCTCGAC
CTGGTGATAA TCGTCGCCCT GGTCGCGCTG AACGGCGTTT TCGCGATGTC CGAGCTCGCG
ATCGTGTCCG CCCGCAAGGC GCGGATGGAG GCGATGGCCC GCGCCGGGCG CCGGGGCGCG
CGCACCGCGA TCCAGCTCGC CGCCGATCCC GGCAAATTCC TGTCGACGGT CCAGATCGGC
ATCACCCTGA TCGGCATCCT CGCCGGCGCC TATTCGGGCG CCAGCCTGGG CGGGCCGGTG
GGCGACCGGC TGGCCCTGCT CGGCGTTCCC GCCGCCAGCG CGCCCGAGAT CGGCTTCGCG
CTGGTCATCG CGCTCACCAC CTTCGTGTCG CTGATCGTCG GCGAGCTGGT GCCCAAGCAG
TTCGCGCTGC GCGCGCCCGA GCCGATCGCC GCGCTGGTCG CGGTGCCGAT GCTGTGGCTG
TCGCGGCTGA CCGCGCCGTT CGTCTGGCTG CTCGACCGGA CCAGCGCCCT GATCTTCCGC
CTGCTCGGCC TGGCCCGCGA GTCCGAGAAT CACGTCACCG CCGAAGAGCT CCACCTGATC
GTCGCCGAGG CCTCCTCGGC CGGCGTGATC GAGGAGAGCG AGCGCGCGAT CATCTCGGGC
GTCGTGCGGC TCGCCGACCG GCCGGTGCGC GAGGTGATGA CGCCGCGCAC CGAGGTCGAA
TGGATCGACA TCAACGCGAC CCCGGACCAG CTGCTGGCGC AGCTCGCCGA GATTCCGCAC
ACGCGCATGC CGGTGGCCGA CGGATCGGTC GACCAGATGC TGGGCGTCAT CCATGCGCGC
GACCTGGTCC GCCGCCTGGT GAAGGGCGAG CCGATCGATC TGGCCGCGAT CCTGCGCAAG
GCGATCGTCA TGCCCGACCA TGTCGAGGCG ATGGACGCGC TCAAGGCGCT GCGCGAGGCG
GAGGTGCCGA TGGCCTTCGT CCATGACGAA TATGGCCATT TCGAAGGGCT GGTCGCGCCC
GCCAACCTGC TCGCGGCGAT CGCGGGCGAA TTCGCGTCCG ACCAGGACGA TCATACCGAC
CCGCCGTTCG TCGAGCGGGA GGACGGAAGC TGGCTGATCT CGGGAACGCT GGCCGCGGAC
ACCATGGCCG ATCGTCTCGG CATCGACCTG CCCGAGGACC GCGATTTCGC TACGGCCGCG
GGCTTTGCGC TGTGGCGATT GAAGCATCTG CCCACCACCG GCGAATCGTT CGACCATCGC
GGCTGGCGTT TCGAGGTCGT CGACATGGAC GGCCGGCGTA TCGACAAGCT GCTTGCGGCG
GTGATTCCGG GGGCTGAATA G
|
|---|
| Protein sequence | MNVASAMPHP VPLAPFPWLD LVIIVALVAL NGVFAMSELA IVSARKARME AMARAGRRGA
RTAIQLAADP GKFLSTVQIG ITLIGILAGA YSGASLGGPV GDRLALLGVP AASAPEIGFA
LVIALTTFVS LIVGELVPKQ FALRAPEPIA ALVAVPMLWL SRLTAPFVWL LDRTSALIFR
LLGLARESEN HVTAEELHLI VAEASSAGVI EESERAIISG VVRLADRPVR EVMTPRTEVE
WIDINATPDQ LLAQLAEIPH TRMPVADGSV DQMLGVIHAR DLVRRLVKGE PIDLAAILRK
AIVMPDHVEA MDALKALREA EVPMAFVHDE YGHFEGLVAP ANLLAAIAGE FASDQDDHTD
PPFVEREDGS WLISGTLAAD TMADRLGIDL PEDRDFATAA GFALWRLKHL PTTGESFDHR
GWRFEVVDMD GRRIDKLLAA VIPGAE
|
|---|
| |