Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2282 |
Symbol | |
ID | 5196847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2537226 |
End bp | 2537822 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581828 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_001262779 |
Protein GI | 148555197 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.142259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGTC CCCTCATGAA ACTCCTCCAC CTCGATTCCT CGATCCAGGG CGATGCCTCG GCCAGCCGGC ACCTGTCGGC GGCGGTGGTC GACCGCCTCC AGGCGCTGCA TCCGGCGCTC GACATCGCCT ATCGCGACCT CGCCGCCGAT CCGCTACCGC ACATCGTGCC GGCCGGCTTC GCCACCCCCG AGGCCGCCGC TTTGCTCGAC CAGTTCCTCG CGGCCGACAT ATTGGTGATC GGCGCGCCGA TGTACAATTT CGGCCTGCCG AGCCAGCTCA AGGCCTGGTT CGACCATATC CTCGTCGCCG GCAGGACCTT CCGCTACACC GAGGCCGGCG CCGAAGGCCT GGCCGGCGGC AAGCGCGCGA TCGTCGCGCT GTCGCGCGGC GGCTTCTATT CGGAGGGCCA CCCCGGCGCC GCCTTCGAAC ATGCCCAGAG CCATATCGGC GGGATGCTCG GCTTCATCGG CATCCAGCCC GAATTCGTCG TCGCGGAGGG CGTCGCCTTC GGCCCCGAGC AGCGCGCCGC CGCGATCGCC GCCGCCGAGG CGCATATCGC CACGCTCGAA CCCGTCGCGC TGCGGACCGC CGCCTGA
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Protein sequence | MDSPLMKLLH LDSSIQGDAS ASRHLSAAVV DRLQALHPAL DIAYRDLAAD PLPHIVPAGF ATPEAAALLD QFLAADILVI GAPMYNFGLP SQLKAWFDHI LVAGRTFRYT EAGAEGLAGG KRAIVALSRG GFYSEGHPGA AFEHAQSHIG GMLGFIGIQP EFVVAEGVAF GPEQRAAAIA AAEAHIATLE PVALRTAA
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