Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2231 |
Symbol | |
ID | 5197282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2487092 |
End bp | 2487934 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640581777 |
Product | hypothetical protein |
Protein accession | YP_001262728 |
Protein GI | 148555146 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTTCC AGAAAACCAC CGCCGCCGTC CTCGCGCTGT TCGTCGCGAC GCCGGCCCTG GCCCAGGAGG AAAGCTCGCC GTTCAGCGTG TCCGGCAGCA TCGGCCTCGC CAGCGACTAC CGCTTCCGCG GCGTTTCCCA GACCGACAAG GAGATGGCGA TCCAGGGCGG CATCACCGTC GGTCATGAGA GCGGCTTCTA TGTCGGCACC TGGGGATCGA ACCTCGCCGG CTGGGGCACC TTCGGCGGCT CCAACACCGA GCTCGACATC TTCGGCGGCT ACAAGGTCGC GCTGGGCGAA GGCGTCGCGC TCGACGCGGG CCTCACCTGG TTCATGTACC CGGGCGGCGC CGACAAGACC GACTTCGCCG AACTCTATGC CAAGCTCAGC GGGACGCTGG GCCCGGTCAC GCTGCTCGGC GGCGTCGCCT ATGCGCCGAA GCAGCAGGCG CTCGGCCGCT GGTATGTCTC GGGCGCGTCG GCTTCGACCG GCGTCTACGA CGATCCGGGC GACAAGGAGG ACAATCTCTA CCTCTGGGCC GACGTCTCCG GCGCCATTCC GCAGACCCCG GTCACGCTGA AGGCGCATCT CGGCTATTCG AATGGCAATG CGGGCCTCGG CCCCAACGGC ACCAGCATCG CGCCGACCGG CAAATATCTC GACTGGCTGG TCGGGGTCGA CGTCGCGGTT CCGGGGACCC CGGTCACGGC GGGCGTCGCC TATGTCGATA CCGACATCGG CAAGAGCGAA TCGGCCTATC TGCTGCCGAA CTTCGCATCG ACGAAGAACG GTTCGTCGAT CGCCGGCGGC AAGCTGGTCT TTTCGCTGAC GGCGGCTTTC TGA
|
Protein sequence | MRFQKTTAAV LALFVATPAL AQEESSPFSV SGSIGLASDY RFRGVSQTDK EMAIQGGITV GHESGFYVGT WGSNLAGWGT FGGSNTELDI FGGYKVALGE GVALDAGLTW FMYPGGADKT DFAELYAKLS GTLGPVTLLG GVAYAPKQQA LGRWYVSGAS ASTGVYDDPG DKEDNLYLWA DVSGAIPQTP VTLKAHLGYS NGNAGLGPNG TSIAPTGKYL DWLVGVDVAV PGTPVTAGVA YVDTDIGKSE SAYLLPNFAS TKNGSSIAGG KLVFSLTAAF
|
| |