Gene Swit_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2182 
Symbol 
ID5200729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2445406 
End bp2446089 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID640581727 
Producthypothetical protein 
Protein accessionYP_001262679 
Protein GI148555097 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.181107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000029708 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATCCCCC TCTCCACCGA TGTGGTGCGC TTCGTGCCGC CGATCTTCGA CAAGGCCGAC 
CCGGCCGCGC CGGCCTTCTT CCTGCGGCCC GGCGATCCGA TCGAGCGCGA GCTGTTCGAA
GCCGAGCTGG CCGGCGACTA TCGCGCTGGC CGCGTCTTCC AGGCCGATCT CAACCGGACC
TTCTCGGAGG GGGTCGCGGT GCTGATGGCC GCCGATCCGG GCCGCGACAC GCTGCTGGCG
CTGGTCGCGG CGGAAGGCGC GCTGGAGGAT GGCGAGGCGC TGCCCGTCGA GGAACGGCAG
TTGCTTGCGG CCGCGCGCGA CGCGATGGCC GATCACTGGC CCGAATATCG CGCGCTGATC
GTCGAGATGA ACCGGCGCCA CCAGCTTCTG CCGCTGGTCG CCTTCCGCCG CTTCTGCAAG
GGGTGGGAGA ATATCGACGC GGCGCTGCCG TTCGCGGCCG GACCGGACAG GCTGGTGACG
CTGGCGGCGA CGGGCTCTAT CCCGCGCTCG CTGATGAAGA TGGCGGGGTT CGAAGCCTAT
GCGATGCTCA ACGCCGGGCA GCACGCAAAA AACTCCGGGG CGGCCTCGAA GTCCGACGAC
GGCCTGCCGA CTTCGCCTTC GGACGCGCCA TCGATGGCGG ATGGGACATC GGCGGGGACC
GATGGGCTGA AAACCCCCGA CTGA
 
Protein sequence
MIPLSTDVVR FVPPIFDKAD PAAPAFFLRP GDPIERELFE AELAGDYRAG RVFQADLNRT 
FSEGVAVLMA ADPGRDTLLA LVAAEGALED GEALPVEERQ LLAAARDAMA DHWPEYRALI
VEMNRRHQLL PLVAFRRFCK GWENIDAALP FAAGPDRLVT LAATGSIPRS LMKMAGFEAY
AMLNAGQHAK NSGAASKSDD GLPTSPSDAP SMADGTSAGT DGLKTPD