Gene Swit_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2180 
Symbol 
ID5200636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2443984 
End bp2444475 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content54% 
IMG OID640581725 
Producthypothetical protein 
Protein accessionYP_001262677 
Protein GI148555095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0163358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000274139 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATGAAAT ACATGGTTGC AGCTGGCGTG GCGATCGCTC TGGCGCTGGC AGGATTGGGT 
TTTCTGCTCG GATGGATTCC AGGGACCGAT CGACACCTCA TTGAGATCAG GAAAGCCCAA
GTTGCCGCGA GCCTGGTCGA TCCAGCATCA GCGCAATTTC GACATGTCGC CATCTCGATC
GACAAGCGGT CGACAATCAA GAACCGTTGG GTCTGTGGGG AGATAAACGG CAAAAATCGC
ATGGGAGCCT ATGCCGGATT TACGCCATTC TACATCAGCG AGGATGGGGC GTCGGGATGG
ATATCCCAAC GAGATCGGCC CGACGACGAG CAGATTGACG ACGCCGATCG ACGCTGCACC
GAAGCTGTGA GGTCTGGCTA TGGCTATCGA TATGCTTGTG AGCGGAAAGA TGAATTAGTC
GAAAAGCGTA ATGCCTTCGA CAGGGAGATC GTCGCTTTTC GTGAAGCTTG TAGTAATGGC
CTCGCACTAT AG
 
Protein sequence
MMKYMVAAGV AIALALAGLG FLLGWIPGTD RHLIEIRKAQ VAASLVDPAS AQFRHVAISI 
DKRSTIKNRW VCGEINGKNR MGAYAGFTPF YISEDGASGW ISQRDRPDDE QIDDADRRCT
EAVRSGYGYR YACERKDELV EKRNAFDREI VAFREACSNG LAL