Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2149 |
Symbol | |
ID | 5199622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2409374 |
End bp | 2410582 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640581694 |
Product | hypothetical protein |
Protein accession | YP_001262646 |
Protein GI | 148555064 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0531927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGGCA CCACCTTCCT GCTCGCGGTG CGCGAGATAA GGCGGCATCT GTTGCGCTCC TTCCTGACCA TCCTCGGCAT CGTCATCGGC GTCTGGGCGG TGGTGACGAT GGTGACGCTG GGCCAGGGCG CGACCGCTGC GGTCAAGCAG CAGATCTCCA GCCTCGGCGC CAACGTCCTC CAGGTCCGGC CCGGCCAGGG CTTCGGGCGC GGCGGCGGCG GGCCGCAGCC GCCCGACTTC AAGATCGAGG ACCTCGACGC GATCCGCACC CAGATCGTCG GGGTGCAGGC GGTGGCGCCG CTGGTCCAGT CGACCGGCAC CGCCGTCTAC AACGCGGCCA ACTGGTCGAC GACGGTCAAC GGCACCAACC GCGAATATTT CACCGCCCAG CCCTGGACCT TCACCGGCGG GCGGATCTTC TCGCCGGCGG AGGAGCAGGC GGGCAAGGCG GTGTGCATCG TCGGCAACAC CGTCCGCAAC CGGCTGTTCC GCGGCATCGA CCCGGTCGGC CAGCGCTTCC GCATCAAGAA CATCTCGTGC GAGATCATCG GCACGCTGGC GCCCAAGGGG CAGGGCGGCT TCGGCAACGA CCAGGACGAC ATCGTGCTGA TGCCCTACAA GGCGGTGCAG CGGCGGATGA CCGGCAATCG CGACGTCCGC ATGATGATGA TCTCGGTCGA CGCCGACTAT GACAGCCAGC GGGTGCAGGC GTCGCTGCGC GACCTGCTGC GCGAGCGCCG CCACCTGAGC GACGGGGCCG AGGACGACTT CAACATCTTC GACACCAAGC AGATATCCGA CACGCTGTCG GGCACCACCC AGATCCTCAC CTCGCTGCTC GGCGCAGTGG CGGCGGTCAG CCTGCTGGTC GGCGGCATCG GCATCATGAA CATCATGCTC GTCTCGGTGA CCGAGCGGAC CCGCGAGATC GGCATCCGCC TCGCCATCGG CGCCGTCGCG CGCGAGGTGC TGCTGCAATT CCTGGTCGAG GCGGTGACGC TCGCCTGCCT GGGCGGGCTG CTCGGCCTGT TCCTGGCGCT GGTCTCGACC CTGATCCTCG CGCCGGTGCT GAAGGTGCCG TTCATCTTCG ATCCGCAGAT CAACCTCGTC GCCTTCATCT TCTCGGCGCT GATCGGGGTG GTGTTCGGCT ATTTCCCGGC GCGGCGCGCG GCGTCGCTCA ACCCGATCGA GGCGCTGCGG CACGAATGA
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Protein sequence | MWGTTFLLAV REIRRHLLRS FLTILGIVIG VWAVVTMVTL GQGATAAVKQ QISSLGANVL QVRPGQGFGR GGGGPQPPDF KIEDLDAIRT QIVGVQAVAP LVQSTGTAVY NAANWSTTVN GTNREYFTAQ PWTFTGGRIF SPAEEQAGKA VCIVGNTVRN RLFRGIDPVG QRFRIKNISC EIIGTLAPKG QGGFGNDQDD IVLMPYKAVQ RRMTGNRDVR MMMISVDADY DSQRVQASLR DLLRERRHLS DGAEDDFNIF DTKQISDTLS GTTQILTSLL GAVAAVSLLV GGIGIMNIML VSVTERTREI GIRLAIGAVA REVLLQFLVE AVTLACLGGL LGLFLALVST LILAPVLKVP FIFDPQINLV AFIFSALIGV VFGYFPARRA ASLNPIEALR HE
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