| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2145 |
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| Symbol | |
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| ID | 5197994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2405007 |
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| End bp | 2406266 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581690 |
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| Product | branched-chain alpha-keto acid dehydrogenase E1 component |
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| Protein accession | YP_001262642 |
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| Protein GI | 148555060 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.967449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.931477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCC GTAACCTGCC GCCGCTGTCG CTTCACGTGC CCGAGCCGGC GTTCCGGCCG
GGCGACACGG TCGACTTCGC CGACTTCGAC ATGCCCGTTG CCGGGGCGGT GCGCCGGCCG
CCGGTCGACG CCGGCCCGGC CGAGCTCCGC GACATGCCCT ATGCGATGGT CCGCGTGCTC
GACGACGAGG GGCGGGCGCA GGGGCCGTGG GATCCGCGCC TCGCGCCCGA GACGCTGCTC
AAGATATTGC GCAGCATGGC GCTCACCCGC GCCTTCGACG AGCGGCTCTA CCGCGCGCAG
CGCCAGGGCA AGACCAGCTT CTACATGAAG TGCACCGGCG AGGAGGCGAC CTCGGTCGGC
GCCGCCCATG CGCTCGACTA TGACGACATG TGCTTCCCGA GCTACCGGCA GCAGGGCCTG
CTGATCGCGC GCGACTGGCC GATCGTCGAC ATGATCAACC AGATCTACTC GAACCGCGCC
GACCGGCTGA AGGGCCGCCA GATGCCGATC ATGTATTCGG TGCGGCAGGC CAGTTTCTTC
TCGATCTCGG GCAACCTCAC CACCCAATAT CCGCAGGCGG TGGGCTGGGC GATGGCGAGC
GCGGCGCGCG GCGACACGCG GATCGCGGCG GCCTGGTGCG GCGAGGGATC GACCGCCGAG
GGCGATTTCC ATTCCGCGCT GACCTTCGCC GCCGTCTATC GCGCGCCGGT CATCCTCAAC
GTCATCAACA ACCAGTGGGC GATCTCGTCC TTCTCGGGCT TCGCGGGGGC CGAGGCGACG
ACCTTCGCGG CGCGCGCGAT CGGCTATGGC ATCGCCGGCC TGCGCGTCGA CGGCAATGAC
GCGCTCGCCG TCTATGCCGC GACGCAATGG GCGGCGGACC GGGCGCGCAA CAACCACGGC
CCGACCCTGA TCGAACATTT CACCTATCGC GCCGAGGGTC ATTCGACCTC GGACGACCCG
ACCAAGTACC GATCGGCCGA GGAGGGTGGC AAATGGCCGC TCGGCGACCC GATCGCGCGG
CTCAAGAAGC ATGTCGTCGG CCTCGGCATC TGGGACGAGG AGCGCCAGGC GGCGATGGAC
CTCGAGGTCG CCGAGCTGGT CAAGGCCGCC CAGAAGGAGG CCGAGAAGAA CGGCATCCTC
CAGGACGGCC TCAAGCAATC CTTCGATTCG ATGTTCGAGG ACGTGTTCGA GGAGATGCCG
TGGCACCTGA AGGAGCAGTC GGTCCAGATG CACGACGAGC GCAAGGCGGC AGGGATATGA
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| Protein sequence | MTGRNLPPLS LHVPEPAFRP GDTVDFADFD MPVAGAVRRP PVDAGPAELR DMPYAMVRVL
DDEGRAQGPW DPRLAPETLL KILRSMALTR AFDERLYRAQ RQGKTSFYMK CTGEEATSVG
AAHALDYDDM CFPSYRQQGL LIARDWPIVD MINQIYSNRA DRLKGRQMPI MYSVRQASFF
SISGNLTTQY PQAVGWAMAS AARGDTRIAA AWCGEGSTAE GDFHSALTFA AVYRAPVILN
VINNQWAISS FSGFAGAEAT TFAARAIGYG IAGLRVDGND ALAVYAATQW AADRARNNHG
PTLIEHFTYR AEGHSTSDDP TKYRSAEEGG KWPLGDPIAR LKKHVVGLGI WDEERQAAMD
LEVAELVKAA QKEAEKNGIL QDGLKQSFDS MFEDVFEEMP WHLKEQSVQM HDERKAAGI
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