Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2084 |
Symbol | |
ID | 5196226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2342519 |
End bp | 2344282 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581629 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_001262581 |
Protein GI | 148554999 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.81629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGC CGACCGGCGG TGCCGTCGAA ACGAGCCGGG GGCTCGACCC GATCCTGTGC GAGGTCGTCA AGAACAGCCT GATGCTGGTC GCGCAGGAGG CGGGCATCCG CGCCGCGCGC AGCGCGGGAT CGACCTTCGT CGCGGCCTCG GCCGAGATCG CCTGCACCCT CTACGACGCC GACGCCCGGC TGATCGCGCA GACCGAGGTC GGGATCATGC ACTCGGCCGC GCTGCGCGCG ATGCTGCGGG CCGTGCTGCG CGATCATCCG CCCGAGACGC TGGTCGAGGG GGACGTGCTG ATCGTCAACG ATCCCTTCGC CGGCGGCGTC CACCCGACCG ACGTCGGCGC TTTCCGCCCG GTGTTCCACG AGGGCAGGCC CGCCTTCTAC TGCGGGTTGA TGATGATCGT GTCGGACCTG GGCGGCCTGT CGTCGGGCGG CCTGCCGGCC AATGCCAGCG AATGCTTCCA CGAAGGGCTG ACCATCCCGC CGACCAAGCT CTACCGCGCG GGCAAGCTCG ACGAGGCGGT GACGCGGCTG ATCTGCTCGA ACAGTCGCAC CCCCGCCAAG CTGATGAGCG ACATCAACGC GCTGGCGGCG GGCGGCAACG TCGCGGCGCT GCGGCTGGTG GAGATGGTCG CGAAGTTCGG CTACGAACCG CTCGGCGCAA TGATCGACGA GCTGCTCGAC TATTCGGAGC GGCTGGTCCG CCAGGGCTTC GCCGAGATGC CCGACGGCGT CTATACCGGC AGCTTCACGG TCGAGAATGA CGGCATCATC CCCGACCGCG ACTATCCGGT CCATGTCCGG ATCGAGATCG ACGGATCGGA ATGCCGGCTC GACTTCAGCG GCAGCGCGAA ACAGGCGACC GGCGCGATCA ATTCGACCGC GTCGCAGACC CTGTCGTGCA TCAACTATGC GCTGCGCTGC CACCTCGACC CGACCATTCC GATGAACGAG GGCTTCTACC GCCCGATCGA GGTGCTGCTG CCGCCGGGCA CGGTGGTGAA CTGCTCCTAT CCCTCGGCGT GCAACATCCG GCTGGCGACG GGGCAGGCGG TGATCGACGC GGTGCTGCAG GCGCTGTCGG TGATCGACGA GACCCGCTCG ATGGCGCCCG GCGCCACCGT CCACACCCTC AACATCCAGG GCGCGACCCC GGACGGCGGC GGGCTGTGGA GCATGCTCGA CGTCTGCTTC GGATCGTGCG GGGCGCGGCA CGGCGAGGAT GGCGGCGACG GCCTGCCGCT GCTGTTCCAC GGTCAGGCCG GCTATGAGCG CAACCTCGAA GGCTATGAAT GGGGCCATCC GGTCCGTTAC CGCTGCTACC GGCTGGCGCC CGACACCAGC GGTCCCGGCC GCTGGCGCGG CGGCGCGGGG CTGGTCAAGG AGATCGAGTT CCAGACCGAC GTAGTGATCA CCGCGCGGGC CACCGACCGC TTCGATCGCC CCCCGCCCGG CATCGAGGGC GGGCTGGCCG GCAGCGGCGC GGCCTGGATC GTCAACCGCG GCGAGGCCGA CGAATATGCC CTGCCCGGCA AGATCACCAA CCACCGGCTG AAGGCGGGCG ACGTGCTGAC CGTCATGTGC CCCGGCGGCG GCGGGCTGGG CGATCCGCTG GAGCGCGATC CGGCGCTGGT GCTCGCCGAT GTCGAGGAGG GGATCGTCTC GATCGAGGCG GCAAGGGAGG TTTACGGGGT CGTGCTCAAC GCGGATCGCA CCGACATCGA CAGAGCGGCG ACCGAGGGGC TGCGCCGTGG CTGA
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Protein sequence | MSEPTGGAVE TSRGLDPILC EVVKNSLMLV AQEAGIRAAR SAGSTFVAAS AEIACTLYDA DARLIAQTEV GIMHSAALRA MLRAVLRDHP PETLVEGDVL IVNDPFAGGV HPTDVGAFRP VFHEGRPAFY CGLMMIVSDL GGLSSGGLPA NASECFHEGL TIPPTKLYRA GKLDEAVTRL ICSNSRTPAK LMSDINALAA GGNVAALRLV EMVAKFGYEP LGAMIDELLD YSERLVRQGF AEMPDGVYTG SFTVENDGII PDRDYPVHVR IEIDGSECRL DFSGSAKQAT GAINSTASQT LSCINYALRC HLDPTIPMNE GFYRPIEVLL PPGTVVNCSY PSACNIRLAT GQAVIDAVLQ ALSVIDETRS MAPGATVHTL NIQGATPDGG GLWSMLDVCF GSCGARHGED GGDGLPLLFH GQAGYERNLE GYEWGHPVRY RCYRLAPDTS GPGRWRGGAG LVKEIEFQTD VVITARATDR FDRPPPGIEG GLAGSGAAWI VNRGEADEYA LPGKITNHRL KAGDVLTVMC PGGGGLGDPL ERDPALVLAD VEEGIVSIEA AREVYGVVLN ADRTDIDRAA TEGLRRG
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