| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2075 |
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| Symbol | |
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| ID | 5196096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2331574 |
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| End bp | 2333853 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640581620 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001262572 |
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| Protein GI | 148554990 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCA AAACGGTGTT GAGCATCCTG GCCGGTGTTT CGCTGGCCGC CTTGGCAAAC
GGCGCCTCGG CGCAGACCGT CCCCGATCAG GCGGACGATC AGCGCCAGGG CCTCGAGGAA
ATCGTCGTGA CCGCCCGCCG TCAGGCGGAA AATCTGCAGA CCACGCCGGT GTCGGTGTCG
GCGGTGTCCG AAAAGATGCT CGCGCGCGCC AACGTCACCC AGATCGACCG GATCACGACG
ATGGTCCCGA ACGTCTCGAT CCAGCAGCAG TCGGGCTTCC TGGGCGGCAA CACCGCCTTC
ATCCGCGGCA TCGGCACGCA GGAGCCGCTG CTGACGGTCG ACTCGCCGGT CGGCATCTAC
ATCGACGGCA TCTATGTCGG CCGCAGCAAC GCGGCGAACT TCGCGCTGGT CGACCTGCAG
CGGGTCGAGG TGCTGCGCGG CCCGCAGGGC ACGCTGTTCG GACGCAACAC CACCGGCGGC
GCGATCAGCA TGACCACCAA GGACCCGTCG GAGGAGATGG GCGGCGCGAT CAAGCTGGGC
CTCGCCAATT ATCGCGAACG GCAGGCGGCG GCCCGCTTCG ACACCGGCAA GCTAGGCAAT
AGCGGGATCG CGGCGACGCT GTCCTACCAG CATATGCAGC ATGCCGGCTT CACCAAGAAC
CCCTTCTCGT CGAGCCGGGC GACGACGCCG GGCAGCCTCA ACAGCGACGC CGTCTGGGCG
AAGGTGAAGG GCGAATGGGG CGATTTCAGC GCCACCTACA TCTTCGACTG GAACGACCTG
AGGGGCCTGC CGCTGGCGCA GCAGCCGCGC TTCATCTCGA ACAACGTCCG CGGCTATTAC
ACCAATGCCA CCAATGGCGG CCTGTTCCTG AGCAACGTCA GCGAGTCCTA CAAGAAGTCG
CTCAACCTCG CCATCGCGGG GCAGCAGAAG GTCAAGATCT GGGGCCATGG CCTGACCCTC
GAATATCATG TGTCGGACGC GTTGAACTTC AAGTCGATCA CCGGCTTCCG CTCCTATCGC
GCCAATCCGC TGGGCACCTA TTACGGCCCG CCCGGCGTGT TCGGTCCGAC CACGACCGGC
ATCCAGGAGG TCTATCCGTT CCTGAGCCTC AAGAAGGTCG AGGAGACCGA CCAGGTCTCG
CAGGAATTCC AGGTGCTTGG CGACACCGGC CAGTTCAAAT ATGTCGCGGG CCTCTATTAC
TTCAAGGAGG ACGGCTCGAC GACCAACCCG TCCAACTCGA CCTTCGTCAT CTCGCCGACC
CTGGCGTCGA ACACCGCATC GGTGCTGCAA TTCGGCTTCA AGGCGAAGTC CTATGCGGCC
TTCGGCCAGG CGAGCTATCG CCCGGCCGCG TTCGACGACA AGCTCGAGCT GACCGCCGGC
GTCCGCTACA CCAAGGACAA GAAGGAGGTG AGCCAGACGC TGCCGAGCAT CCGCAACGGC
AAGAACACCT TCAACAACAC CTCGTTCAAC GCGATCGTCT CCTACCAGTT CACCGATCGC
GTGATGACCT ATGCCCGCTA CGGCACCGGC TATCGCTCGG GCGGGTTCAA CACCCGCGCC
TCGGCGACGC AGAACTTCGT CTTCCTGCCC GAGAAGGCGA AGACGGTCGA AGCCGGCATC
AAGACCGAGT TCTTCGACCG GCGGCTGCGC TGGAACGCCG CGGTGTTCAA CACCGACTAC
AGCAACCTGC AGGTGACCCA GTTCGTCACC ACTTCGGTCG GCAACAGCGG CGGCTTCACC
TCCAACGCCA AGGCGACCTT CAAGGGCTTC GAGGGCGAGT TGCAGGCGGT GCCGGTGAAG
GGCCTGACCC TGTCGAGCAG CCTCGGCTAT GTCGATCCGA AGTACAAGGT GTTCATCGCC
CCCAATCCGG CGGTGCCCGG CACCTTCTTC AACGCCGCCG ACCAGAGCGA ATTCCCCTAT
GTGCCGAAGT GGACCGCCAA TGCGAGCATC CAGTATGAAG GCGACGACGT CGGCTTCGGC
CGGCCGCTGG CCCGGCTCGC CTATTCCTAC ATGAGCAACC GCTTCTTCCA CGCGAACCAG
TTCTCGGGGA ACGTCTTCTA CCGGAACATC CGGTCGGGGG CGAACAAGCG GCTCGACGGG
CGGATCGGCC TGACCGATAT CGCGCTCGGC GCGACCACGG TCGACCTGTC CTTCTATGTC
GACAACATCA CCAACCGCCA CAACATCATC TCGGGCATCG ACTTCGGTGC GCTGGGCTTC
GCGATCAACA GCTATGCGGC GCCGCGGCGC TTCGGCCTCG ATCTCAAGGT CAGCTTCTGA
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| Protein sequence | MTRKTVLSIL AGVSLAALAN GASAQTVPDQ ADDQRQGLEE IVVTARRQAE NLQTTPVSVS
AVSEKMLARA NVTQIDRITT MVPNVSIQQQ SGFLGGNTAF IRGIGTQEPL LTVDSPVGIY
IDGIYVGRSN AANFALVDLQ RVEVLRGPQG TLFGRNTTGG AISMTTKDPS EEMGGAIKLG
LANYRERQAA ARFDTGKLGN SGIAATLSYQ HMQHAGFTKN PFSSSRATTP GSLNSDAVWA
KVKGEWGDFS ATYIFDWNDL RGLPLAQQPR FISNNVRGYY TNATNGGLFL SNVSESYKKS
LNLAIAGQQK VKIWGHGLTL EYHVSDALNF KSITGFRSYR ANPLGTYYGP PGVFGPTTTG
IQEVYPFLSL KKVEETDQVS QEFQVLGDTG QFKYVAGLYY FKEDGSTTNP SNSTFVISPT
LASNTASVLQ FGFKAKSYAA FGQASYRPAA FDDKLELTAG VRYTKDKKEV SQTLPSIRNG
KNTFNNTSFN AIVSYQFTDR VMTYARYGTG YRSGGFNTRA SATQNFVFLP EKAKTVEAGI
KTEFFDRRLR WNAAVFNTDY SNLQVTQFVT TSVGNSGGFT SNAKATFKGF EGELQAVPVK
GLTLSSSLGY VDPKYKVFIA PNPAVPGTFF NAADQSEFPY VPKWTANASI QYEGDDVGFG
RPLARLAYSY MSNRFFHANQ FSGNVFYRNI RSGANKRLDG RIGLTDIALG ATTVDLSFYV
DNITNRHNII SGIDFGALGF AINSYAAPRR FGLDLKVSF
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