| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2073 |
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| Symbol | |
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| ID | 5196094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2329034 |
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| End bp | 2330179 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640581618 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001262570 |
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| Protein GI | 148554988 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAC GCGACGAGAC GCCGCCCGCG AGGCTGCTCG AGGCGCTGTA TGCCGGCGTC
GCCGACGTCG CCGCGTGGAA CCGCTTCCTG CTCGCCTTCG CCGACCATAT GGGGGCGAGC
CGCGCGGTGC TGCTGCTGAC CCGTGCGGGC GAGGACCGGC CGCGCGAGAT ATTGTCGCCG
GGCAGCGACC GGCGCCGCGC CGCGCTCTAT GTCGACCGCT ATTTCGCGAC CGACCCCTTC
GTCGGCCTGC CGCAGACGCG GGTGGTGTCG TTCGGCGAAT TCCTGAGCCG GCGCGCTGCG
GGCGAGATCC GCGCCATCCG CGCCTATCTG TCGGAGACGG TCGGCAGCCA GATATTGGGC
GTCGACATCG CCCCCGCGCC CGGCCTGGTC GCGCGGGTCA GGGTCGCGCG GCTGCTCGGC
CTGCCCGACT TCGGCGGGCG CGAGCGGGCG CGGATGGAGG CGATGGTGCC GCACCTGGCG
ATCGCGCTCA GGGGCCTGGC GCTGACGATG CGCCGGGACG CCGAATGCGC GATCCTGCGC
GACGCGCTGG CGGCCAGCGG ACAGGGCACG CTGGTGATCG ACCGCGACCG CCGGATCATG
GTCAGCGACG GCATCGCCGA CGCGCTGATC GCGCGCCGCG CCGGCCTCAG CGCGTCCAAC
ACCCGGCTGC GGCTGGCGAC CGCCGCCGCC GACCGGCAGC TCGGCGCCTA TCTCGACGCG
GCGCCCGGCG ACGGCGACGA AGCCGGCTGC ACCCTGCTGG TCGACCCGGC CGGCGACGAC
GCGCCGATCG CCGTCGCGGT GCGCCCGATC CGGCCGGCGA TGCCGGTCTG GACCTCGGAC
CGCGACCTGC TGCTGCTGCG GGTGCGCGAT CCGTCGCGCC GGTCGCGCTT CGACGCGGCG
GCGCTGCGCG GGCCCCTGCC GCTCACGTCG GCCGAGGCGG CGGTCACCGC CGCGATGGCC
AATGGCGAGA CGCTGCGCGA GGCCGCGTCG CGGCTCGGCA TCACCTACAA TACGGCGCGC
GCGCATCTCC GCGCGATCTT CGCCAAGACC GGCACGACCC GGCAGGCCGA GCTGCTCGCC
CTCGTCCAGA CGCTAGTCCC CGCCCGGCAG CCGGCCGCCA CCGATCGCCG CCACGCACAG
CGCTAG
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| Protein sequence | MAARDETPPA RLLEALYAGV ADVAAWNRFL LAFADHMGAS RAVLLLTRAG EDRPREILSP
GSDRRRAALY VDRYFATDPF VGLPQTRVVS FGEFLSRRAA GEIRAIRAYL SETVGSQILG
VDIAPAPGLV ARVRVARLLG LPDFGGRERA RMEAMVPHLA IALRGLALTM RRDAECAILR
DALAASGQGT LVIDRDRRIM VSDGIADALI ARRAGLSASN TRLRLATAAA DRQLGAYLDA
APGDGDEAGC TLLVDPAGDD APIAVAVRPI RPAMPVWTSD RDLLLLRVRD PSRRSRFDAA
ALRGPLPLTS AEAAVTAAMA NGETLREAAS RLGITYNTAR AHLRAIFAKT GTTRQAELLA
LVQTLVPARQ PAATDRRHAQ R
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