| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2045 |
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| Symbol | |
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| ID | 5200882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2295292 |
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| End bp | 2297655 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640581589 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262542 |
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| Protein GI | 148554960 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.785428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC GGCGTCATGG TCCGCGTGGC GGGCTATATT CGCGTCATCT CATTACTATC
GGTGTTGCCG GTTTATCGAT ATTCCCGGCG CCCGCTCTTG CCCAGCAATC GGCACAAGCA
TCCGTCGACG ATGAGATCAT CGTCACGGCG CAGCGGCGCG AGCAAAACCT CCTGGACGTC
CCGATCGCCG TCACGGCGCT TCAGGGGCGT TTCCTCCAGG ACCGGTCGAT CACCACCATC
GACAATCTGA GCGCGCTGGC GCCGGGGCTG CTGGTCAGCT CGACCGCGAC GCAACCGAAC
AACGCCCAGC TGTCGATCCG TGGCTCGGTG CAGCAGAACG GCTCGATCAT CCTCGATCCG
TCGGTCGGGC TCTACCTGGA TGGCGTCTAT ATCGGCAAGG CGCAGGGATC GATCTTCGAC
ATCAACGATC TCGAACGCGT CGAGGTGCTG CGCGGTCCGC AGGGCACGCT CTACGGACGC
AATACGCTGG CCGGGGCGAT CAGCTTCATC ACCCGCAAGC CCGACGATCA GCTGCGCGCA
TCCGCCGAGG CCGGCTTCGG AAACTATGAC GCCCATACGA TCCGGGGCCT CGTCAACGTC
CCGCTGAGCG AGCATCTGTT CGTCAAGCTT TCGGGGATGA CGTTCAAGCG CGACGGCAAT
GTGCGGCTCG TGCCCGATTC CGCCGCGATC GGCGGGACTC CGCTCGGCTT CATCTACAAC
AACTCCGTGG TCGGCCATCC CCAGGGCGGG GGCGCGCAAA CCGGCCAGGC CGGCACCCGC
AACCGACAGA GCCTGCTGGC CCAGGTCCGC TATGCGCCGA GCACCGATCT GACCGTCGAC
TATTCCTACG ACTACAGCCG CACGCGCGGC AATGCGGATG CCAGCCAGCT CGACAGCGTC
GATCCCAACG GCTTCCTGGG CGCCAATTGT GCCTTGGGGC CCGCCGTCTG CATCCCGGCC
TATCTCTACG TGCAGCCGAA ATATTCGAAG ACCATGTCGA GCGATTACAC CCATCTCGAT
CGGATCGAGA TCAACGGACA TGGCCTGACC GTCACCTGGA ATACCGGCCC GGTCACGCTC
AAGTCGATCA CCGGCTATCG CAAGATGGAT TATGACGGCG CGGTCGTCGA ACTCGACGGA
ACGCCGCTCT GGCTCGCGAG CGGCGGACTG GATACGAAAT ACAAATCGTT CAGCCAGGAA
TTGCAGGCGA CGGGAACGAT CGGCGATCGA CTGAACTATG TCGCCGGCCT CTATTATTTC
TGGGACGACG GCTTCACCCG CAGCCCGCAA TCCTTTTTCT TCGGCGCGGT CAACTACGAC
ACCAGCTGGG GCGGCACGAC CAAGGCCTAT GCGATCTACG GGCAGGCCGA CTACAAGATC
ACCGACCGGA TCGTCGTGAC CGCCGGGCTG CGCTACACCA AGGAGCGCAA GACCGTCGTG
CGCAGCTCGA TCCTGCTGCC CAACACGGTC CTCGTCGACG TTCGCAAGTC GGACGGCGTC
TCGAAGGACT TCTCCGCTCT CAACCCGACG ATCGTCCTCG CCTACAAGCC GAGCGATCGG
CTGAACACCT ATGTCAAGTT CGCGCAGGGC TATCGTAGCG GCGGGTTCAA CGGCGAGGCG
ACCTCCAACA TCGCCACCAC CACGCCCTTC CGGCCCGAGA CGATCAATTC GATCGAGGCG
GGATTGAAGA CATCCTGGTG GAACGGACGG GCCGACCTGA ACATCGCGGC CTTCCACAAT
CATCATCGCA ACATGCAGCT GTCCGTGTTC ACCGCGACGT CATCGCTCGC AAGCCTGCTG
CAGAATGCCG GATCGGCCAA TATGAAAGGC GTGGAAGTGG AGGTCTCGGC GCGACCGGCT
CAGGCGCTTC GGGTTTCGGG CAACCTCGCA TATCTCGACG CGTCCTACAG CAGCTATCGC
GACACCAATG CGCTGGGCAC CGTCGTCGAC GTAGCCGACA ACCGCACCAT CCCGCACGCA
CCCAAATATC AGGCAGCGCT GAACGTCGAT CTGCGCGCGT TCCAGGGTTC GGACGGCGAC
AATCTGCACC TGATCTTCGA TGCGCGGTAC ACGTCGAGCT ACTATCTCTA TGCCTATGCG
AAGACGCCGA CGGCGGACTT CCCGCTGGTG CCGCCATCCT CGTCGGTGAA GGCGCAATCG
CTCACGCTCC TCGATCTCCA GCTGCGTTAT GAGGATATCC CGCTCGGCAG GTCGAAGGGG
TGGATCGGGG CATGGACGCG CAACCTCGCC AACACGCACC GGAAAGTGAA CGGCATCAAT
TTCGGCGCCC AGTTCGGCGG GTTGAACATC GCGAACTATA ACGAGCCGCG CACCTATGGG
GTAAGCGCCG GCATCCGGTG GTAG
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| Protein sequence | MDDRRHGPRG GLYSRHLITI GVAGLSIFPA PALAQQSAQA SVDDEIIVTA QRREQNLLDV
PIAVTALQGR FLQDRSITTI DNLSALAPGL LVSSTATQPN NAQLSIRGSV QQNGSIILDP
SVGLYLDGVY IGKAQGSIFD INDLERVEVL RGPQGTLYGR NTLAGAISFI TRKPDDQLRA
SAEAGFGNYD AHTIRGLVNV PLSEHLFVKL SGMTFKRDGN VRLVPDSAAI GGTPLGFIYN
NSVVGHPQGG GAQTGQAGTR NRQSLLAQVR YAPSTDLTVD YSYDYSRTRG NADASQLDSV
DPNGFLGANC ALGPAVCIPA YLYVQPKYSK TMSSDYTHLD RIEINGHGLT VTWNTGPVTL
KSITGYRKMD YDGAVVELDG TPLWLASGGL DTKYKSFSQE LQATGTIGDR LNYVAGLYYF
WDDGFTRSPQ SFFFGAVNYD TSWGGTTKAY AIYGQADYKI TDRIVVTAGL RYTKERKTVV
RSSILLPNTV LVDVRKSDGV SKDFSALNPT IVLAYKPSDR LNTYVKFAQG YRSGGFNGEA
TSNIATTTPF RPETINSIEA GLKTSWWNGR ADLNIAAFHN HHRNMQLSVF TATSSLASLL
QNAGSANMKG VEVEVSARPA QALRVSGNLA YLDASYSSYR DTNALGTVVD VADNRTIPHA
PKYQAALNVD LRAFQGSDGD NLHLIFDARY TSSYYLYAYA KTPTADFPLV PPSSSVKAQS
LTLLDLQLRY EDIPLGRSKG WIGAWTRNLA NTHRKVNGIN FGAQFGGLNI ANYNEPRTYG
VSAGIRW
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