| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2033 |
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| Symbol | |
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| ID | 5197892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2278906 |
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| End bp | 2281362 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640581577 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262530 |
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| Protein GI | 148554948 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.795127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAAGA GGGATATCCG CTCAACAGCC AGTGCCATCA TCCTGACAAT GGGACTCATG
GATGCGGCGT CCATGGCGCA GGCGCAAACC ATGCCCGCCG ACGGTAGCGA TATCGTCGTC
ACGGCGCGCA GAAGCTCAGA GAAATTGAAG GACGTCCCCG CTTCCATTTC CGTCATCGAC
AATAGCACCA TCAAGAATGC GGGGGTGGTG ACGATCACCC AGATGACCAA CCTGGTGTCG
GGCATGACGA TCGTCGCCAA TACCTCTCAG GTCGGTGATA CCCAGATCAA TATCCGTGGC
ATCAATGGCG CGCGCGATGC CGAGAGCAAT GTCGCGCTCG TCGTCGACGG CATCCTCAAG
ACCAACACCT CGGCGCTCAA CCAGTATCAG GGAGATCTTC AGCAGGTCGA AATCCTGAAA
GGGCCGCAGG GCGCCTATTA TGGCCGGAAC GCCGCGGCGG GCGCGATCGT CATGACCACG
AAGGCGCCGG GCGACATGTT CGTCGTCGAG GGGCGGGCGA GCTATGCCAC GCAGGATACG
AGGCTTCTGC AGGGCTCCGT CAGCGGGCCG ATCAGCGAGA CCGCGGGGTT CGTCCTGTCG
GGCGACTATC GGTCGACGGA CGGCTTCTAC CGCAACACCG GCCCCACCCC GGCAACGCGA
GGCCATAGCG TGGACGACTC GCGGAACTGG AATATCGGCG GCCGCATCGT CCTGACGCCG
ACGGATGCCG ATCGGATCGA CCTGAAGGCC CGTTATGGCA AGATCCGGGC GACGCCCCTG
GCCTTCGATG CCGTTTTCGC GCTTCCGGGC TTCGCCGGCG CCTTCGGCAA TCCGCTGTTC
GACGAAGACG TCAACGACCA CAAGCTGGTG TATAATCGCA ACATCCGCGG CGCCAACCGG
CTCACCTCGA AGGAAGCATC GGCAAAGTTC AGCCACGACA TGGGGTGGGC GACCCTGACG
AGCTGGGTCT CCTATTCGAA TATCCGGGAA GACCTTCTGT CCGATGCGGC GGCGGGTTCG
CTCGGACGGT TCAACCAGCG CGCTTCGTGC CGGGCATCGG TGGCGGCGCT CTCGGCGGCC
GGCGTCCAGC TCCCCCAACC GCAATTCCTT GCGCCGACGC CCGAGGCGTC GATCCTCGGA
GCCTACACGC CCACCACCTG CGACGGCATC CAGTATACGG TCCGCAACCA GAAGGACGTC
AGTGGCGAAA TCAGGCTGGC GTCCAACCCC GGCGGCCCGC TGTCCTGGTT TGCCGGAGCC
TATTACCTTC ATATCAACCG GCACTTCGGC ACGGCGATCA ATGAGGACCA GGGCCTCGGC
GCTCTGCGAA GCCTCTATAA CGGGCCGGCC AGCATCAATC CCACCTCGCT CCTCTTCGAT
GATCGCTACA AGACCAATGT CTATGCCGGC TTCGGTTCGC TCGAATATGC GCTTTCCGAC
CGTCTGACCT TCTCCGGCGC GTTGCGGTTC GACCGCGAGG ACCGCAAGGT CGATCCCCTG
GTGCCGAACG TGATCGATCC GATCACGAAC GGTCCGATAA ACCCGGGCTT CTCGGTGGGC
GCTATCGTGC CGAAGTCGCG CAAATATCAA CAGCTCCAGC CCAAGGTCGC GATCCGCTTC
AAGGCCAGCG ACGAGTTGAA CCTGTTCGCC GACTGGGGCG TCGGCTTCAA GGCCGGCGGT
TTCAACAGCC AAGGCAGCAC CGCGATCATC GATCAGAATT TCAACGGTCC GCTGGGGTCG
AACATCAATA TCAGCGATGA CTATCGCAAG GAACGATCAA GCGCCTATGA AGCGGGGTTC
AAGGCGTCCC TATTCGACCG GCGCCTGACG ATGGACGGGG CGGTCTATTA CACCACCGTC
CACGACATGC AGTTCTTCGA ATTCTACACG GGTAATTTCG GAATTCTGCG GGTCGTCTCC
AATATCGACA AGGTCAGGCT GTACGGCGCG GAAATGAGCC TGTCCTACCG TGTCGTTCCG
GGCTGGACCC TCTTCGCGAA CGGCAATGTC ACCCGCAGCA AGATCCTGAA GAACAATACG
CGCGCGGACA CGGTCGGCAA CAAGTCGCCG AATACGTCGG ATTACACGAT CAATCTGGGC
ACCCAGGTGA TTGAACCGAT CGGCGAAGGG TTGAACCTGA CGTTCCGGGC CGATTACCGC
ATAACCGGGC CGACCTGGTT CTCCACCGTC CAGAATCAGA CCAAGCGTTC GATCTTCGAC
CTGTTCTTTC CCGGCCTCGG TACCGGTGAA TATGCCAAGT CCCGGCGCGA CGCCTACGGC
ATTCTCGATC TTCGCGCGGG CGTCCAGGCT GAGCGCTGGT CGCTGACCGG CTTCGTCCGA
AATCTGACCA AGAAGAAATA TCTCACCGAA GTGGTCGTGG CGCCCGAGTT CGGCGGCGAG
TTCGTCAGTC AGGGCGAAGG ACGGACGATC GGCCTGGAAC TGGGTTGGCG GTTATGA
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| Protein sequence | MIKRDIRSTA SAIILTMGLM DAASMAQAQT MPADGSDIVV TARRSSEKLK DVPASISVID
NSTIKNAGVV TITQMTNLVS GMTIVANTSQ VGDTQINIRG INGARDAESN VALVVDGILK
TNTSALNQYQ GDLQQVEILK GPQGAYYGRN AAAGAIVMTT KAPGDMFVVE GRASYATQDT
RLLQGSVSGP ISETAGFVLS GDYRSTDGFY RNTGPTPATR GHSVDDSRNW NIGGRIVLTP
TDADRIDLKA RYGKIRATPL AFDAVFALPG FAGAFGNPLF DEDVNDHKLV YNRNIRGANR
LTSKEASAKF SHDMGWATLT SWVSYSNIRE DLLSDAAAGS LGRFNQRASC RASVAALSAA
GVQLPQPQFL APTPEASILG AYTPTTCDGI QYTVRNQKDV SGEIRLASNP GGPLSWFAGA
YYLHINRHFG TAINEDQGLG ALRSLYNGPA SINPTSLLFD DRYKTNVYAG FGSLEYALSD
RLTFSGALRF DREDRKVDPL VPNVIDPITN GPINPGFSVG AIVPKSRKYQ QLQPKVAIRF
KASDELNLFA DWGVGFKAGG FNSQGSTAII DQNFNGPLGS NINISDDYRK ERSSAYEAGF
KASLFDRRLT MDGAVYYTTV HDMQFFEFYT GNFGILRVVS NIDKVRLYGA EMSLSYRVVP
GWTLFANGNV TRSKILKNNT RADTVGNKSP NTSDYTINLG TQVIEPIGEG LNLTFRADYR
ITGPTWFSTV QNQTKRSIFD LFFPGLGTGE YAKSRRDAYG ILDLRAGVQA ERWSLTGFVR
NLTKKKYLTE VVVAPEFGGE FVSQGEGRTI GLELGWRL
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