Gene Swit_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1972 
Symbol 
ID5197178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2209958 
End bp2210410 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content66% 
IMG OID640581517 
Productnucleic-acid-binding protein containing a Zn-ribbon-like protein 
Protein accessionYP_001262470 
Protein GI148554888 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG CCGCCCATTA TCTTCCCGAA GGGCTGCCCG CCCCCGCCCT GGCCGAACCC 
GAGCTGGAAG CCCCCTATTG GGAGGGTGCC CGCGAGGAGC GGCTGCTGGT GCAGCGCTGC
GGCGCCTGCG CGACCTGGCA ATGGGGGCCG GAATGGATCT GCCACAAATG CCTGTCGTCC
GACATGCGGT GGACCGAGGT CGCGCCGCGC GGGCGCATCT ACAGCTATGA ACGGGTCTGG
CATCCGGCGC ATCCGGTGCT GAAGGGGCAT ACCCCCTTCC TTGCCGTGCT CGTCGAACTG
CCGGAGGCAG GCAATGTCCG CATGATCGGC AATCTCCTCG GCGATCCGCT GCAGGATGTG
CAGATCGGGT CAGAAGTCGT AGCCGACTAC GAGCACCACA ACGATGCGAC GCCACCCTAT
ACCCTTGTCC ATTGGCGGAT AGCCCAAGGG TGA
 
Protein sequence
MTDAAHYLPE GLPAPALAEP ELEAPYWEGA REERLLVQRC GACATWQWGP EWICHKCLSS 
DMRWTEVAPR GRIYSYERVW HPAHPVLKGH TPFLAVLVEL PEAGNVRMIG NLLGDPLQDV
QIGSEVVADY EHHNDATPPY TLVHWRIAQG