| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1942 |
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| Symbol | |
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| ID | 5200343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2175734 |
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| End bp | 2177461 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640581487 |
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| Product | heparinase II/III family protein |
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| Protein accession | YP_001262440 |
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| Protein GI | 148554858 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG CGGGCGGGTC CGGCTTCGAC GATCGTGTGG AGCCCGGTCG GCGCCTGATC
CGCGTCGAGC ATGACCGCAG CCATTCGCTC GCCGAGCGCC TCGCCGGCCG CTTCCATGCG
CTGGCCTGGC GCACCCCGGT CCACGGCCTG CGGCTGCGCG GACGCTACCC GCTCAAGCTC
TACGACGTGC CGCCCGACCC GATCGAGGGG CTCGTCCGGC TCGGCGGCGC GATGCTCGAC
GGCGAGATAT TGTGGCAGGG CGAAAGCGTC GCGATCGAAA GCTATGATTT CCGCCCGCGC
GCGATGTCGG CGGCGTTCAG CGACCATCTC CAGAGCTTCG CCTGGCTGCG CGACCTCAAC
GCCGCCGGGC CGCGCCAGCG CGTCGCGCCG ATCGCCGAGC TGCTGACCGG CCGCTGGCTC
GGCGCGTTCG GCAAGCAGAT CCACGAAGCC GCCTGGCGTC CCGACCTGTG GGGCCGCCGC
ATCCTGTTCT GGGGCTGCCA CGCGCCGCTG ATCATGTCGT CGGACGAGCT GCGCGCGCCG
GTGCTCAACG CGCTCGCCCG CGGCGCCAAG CATCTCGACC GCAGCGCCGA CAAGGCGGCG
CCCGGCCTGC CCCGCGTCGC CGCCTGGGCC GGGGTGATCG CGGCCGGGCT GCTGATCCCC
GGCGGCGAGC CGCGCCAGCT TCATGGCGAG AAGGGCATGG AACGGGCGCT GGCCGGCGCG
CTGCACGGCG ACGGCGGTAT CGTCAGCCGC TCGCCGGTCG AGCAGATGGA CCTGATCGGC
CTGCTCGCCA TGCTGCGCCG CTATTACGAG ATGCGCGGCC AGCGGCTGCC CGCCCCGATC
GGCGACGCCA TCGCCCGCGC CGCGCCGCCG CTGCTGGGCC TCACCCTGGG CGACGGCGGC
CTGTCGAGCT GGCAGGGCGC CGCCCCGATC GACGGCGGCC GGGTCGACGC GATCGTCGTC
GCGTCGGGCG TCCGCGCCCG GCCGCTGCGC CAGTCGCGCG ACTGGGGCTA TCAGCGGCTG
TCGGTCGGCC ATAGCCGGCT GGTCGCCGAC GCCGCGCCGC CGCCGGTCTC GCGCTTCGCG
ACCCATGCCT GCGCCTCGAC CCTCGCCTTC GAGATGTCGG ACGGGCCGTG GCGGCTGATC
GTCAATTGCG GGGGCGGCCG GGGCGCCAAC AACGCGCTCC ATCCCGACCT GGCGCAGGCG
CTGCGCAGCA CCGCCGCCCA TTCGACGCTG GTGCTGGCCG ACAGCAACTC GACCGCGATC
CATGGCGACG GCACGCTCGG CAAGGGCGTG ACCGAGGTCG AGGTCGAGCG GCAGGAGGAC
ATGCACGGCA GCAGCATCGA CATGCGCCAC GACGGCTATG TCCGCCGCTT CGGCTTCAGC
CATCGCCGCC GCCTCGTCAT CGGCGCGGGC GGGCGCGAGG TGCGCGGGCA GGACATGCTG
ATCCCCGAGG GACGCCGCCC GCGCGGCGAC GGCGCCGACT ATGCGATCCG CTTCCACCTG
GCGCCCGAGG TCGACGTCTC GGCGACGGCC GACGGCAGCG GCGCGCTGCT GCGGATCGCC
GGCGGCGCGC TGTGGCGCTT CCGCGTCACC GGCGGCGAGG TCGGGATCGA GGACAGCCTG
TGGATCGACT CGCGCGGGCG GCCGCAGGCG ACCCGCCAGC TCGTCATCGC CGGCACCGCC
GCGGCCGACG GGATCGACGT GAACTGGGCG CTCGCCCGGT CCGAATAG
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| Protein sequence | MSDAGGSGFD DRVEPGRRLI RVEHDRSHSL AERLAGRFHA LAWRTPVHGL RLRGRYPLKL
YDVPPDPIEG LVRLGGAMLD GEILWQGESV AIESYDFRPR AMSAAFSDHL QSFAWLRDLN
AAGPRQRVAP IAELLTGRWL GAFGKQIHEA AWRPDLWGRR ILFWGCHAPL IMSSDELRAP
VLNALARGAK HLDRSADKAA PGLPRVAAWA GVIAAGLLIP GGEPRQLHGE KGMERALAGA
LHGDGGIVSR SPVEQMDLIG LLAMLRRYYE MRGQRLPAPI GDAIARAAPP LLGLTLGDGG
LSSWQGAAPI DGGRVDAIVV ASGVRARPLR QSRDWGYQRL SVGHSRLVAD AAPPPVSRFA
THACASTLAF EMSDGPWRLI VNCGGGRGAN NALHPDLAQA LRSTAAHSTL VLADSNSTAI
HGDGTLGKGV TEVEVERQED MHGSSIDMRH DGYVRRFGFS HRRRLVIGAG GREVRGQDML
IPEGRRPRGD GADYAIRFHL APEVDVSATA DGSGALLRIA GGALWRFRVT GGEVGIEDSL
WIDSRGRPQA TRQLVIAGTA AADGIDVNWA LARSE
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