Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1916 |
Symbol | |
ID | 5197057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2149773 |
End bp | 2150465 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581461 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_001262414 |
Protein GI | 148554832 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCG TCGCCAGCTA CAATATCCGC AAGGGCCTCG GCACCGATCG CCGCCGCCGG CCCGATCGCA TCCTCGACGT GCTGCACGAG ATCCATGCCG ACATCGTCGC GCTGCAGGAG GCGGACCGCC GCTTCGGCGC GCGGCAGAGC GCCTTGCCCG CCGAGCTGAT CAGCCAGGGC GAATATAAGG CGGTGCCGTT CGACATCCGG CCGGGCGGGA TCGGCTGGCA CGGCAACGCG ATCCTCGTCC GCCATTCGGT CGAGATCGGC GACTACGAGC CGATCCGCCT GCCGACGCTC GAGCCGCGCG GCGCGGTGAT GGCGGAGCTG AGGGTCGGCG GCAACGACCT CCGGGTCGTC GGCATGCACC TCGACCTGTC GGGGCTATGG CGGCGGCGGC AGGTCCGCGC GATCATCGAT CATATCCGCC GTCGGCGCCA CCGGATGCCG ACGGTGCTGA TGGGCGACCT CAACGAATGG TCGCTGCACG GCGGCTGCAT CCGCGAATTC GCCCCCGAGC TGCAGATCGC GCCGACCGGC CGCAGCTATC ACAGCCGCCG CCCGGTCGGC TGCCTCGACC GGATCATCCT GACCCCCGAC CTGCACCTCG TCGCCTGCGG CGTCCATGTC AGCGAACGCG CGCGGCTGGC GTCGGACCAC CTGCCGATCT GGGCGCGGGT GAATTGGGGG TGA
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Protein sequence | MITVASYNIR KGLGTDRRRR PDRILDVLHE IHADIVALQE ADRRFGARQS ALPAELISQG EYKAVPFDIR PGGIGWHGNA ILVRHSVEIG DYEPIRLPTL EPRGAVMAEL RVGGNDLRVV GMHLDLSGLW RRRQVRAIID HIRRRRHRMP TVLMGDLNEW SLHGGCIREF APELQIAPTG RSYHSRRPVG CLDRIILTPD LHLVACGVHV SERARLASDH LPIWARVNWG
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