| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1901 |
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| Symbol | |
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| ID | 5197097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2130061 |
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| End bp | 2132295 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581446 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262399 |
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| Protein GI | 148554817 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGAGA TTTCAAGGGC GCGCGTCATC GGAATGCTGC TTGCCGGGGC CAGCCTGTCC
GCCGTTCCGG CCCATGCCCA GGATGCCACC TCCCCCGCAG CCGAGGCCTC CCAAGGCGGC
CTGGCCGACA TCGTCGTCAC CGCCGAGAAG CGCCCGAGCA TCGCGCAGCG CGCGCCCATC
GCCCTCTCGG TCGTCACCTC CGAGGCGATC AAGCGGCAGG GCGTCGGCAA CGTCGCCGAC
CTCACCACCC TCACCCCCAG CGTCGGCTTC TCGCAGAACG GCGCCAACAC GGTGATCACC
GTCCGCGGCG TTTCCAGCCG CGACACCAAC CAGCTCGGCG ACCCCGCCGT CTCGATCAGC
CTCGACGGCT TCTACTTCCA GCGCTCGCTG GGCCTCAACA TCGCGCTGTT CGACCTCGAG
CGGGTGGAGG CGCTGCGCGG CCCGCAGGGC ACGCTGCTCG GCCGCAACGC GACCGGCGGC
GCGCTCAACA TCATCACCGC CAAGCCGACC GACAGCTTCT CGGCCGCGCT GACCGGCGAG
GTCGGCAATT ACGACCTGAT CGCGACGCAG GGCTATGTGA ACATCCCGGT CAGCGACAAG
GTGAAGCTGC GCGCCGCCTT CATGACGCGC GACCGCGACG GCTATCGCCA CAACGCCCCG
GCCCGCGATG GCGACGACGA CCACAGCCGC GCCGCCCGCC TCCATCTGCT GTTCCAGCCG
ACCGACCGGT GGGACATCCT GCTGACCGGC GAATATTCGC ACCAGGACGG CGTCGGCCCG
GTGATCCAGC CCGTCGCCCA CCGCTTCCTG CCCAACGGGC AGCTCGACAC CAGCCGGGTC
GACATCCCCG GCGACGGCAA GCGCTTCGCG GTTCCGTCCG GCGGGTTCAT CCGGCTCAAT
TCCTATAATT TCCGCTGGAA CACCAACTAC GACCTCGACT TCGCGACGCT GACCTATCTG
GGCGGCTATC GCTCGCTGAA ATATGCCAAT GTCCGCACCC TGGGCGCCGA CTATGCCACC
AACCGCCGCA ACTTCACCTT CGACCAGCAT GAGCGCCCCC GGTCCTGGAA CCACGAGCTG
CGCCTGTCGT CGAAATCCGA CACGCCGCTG ATCTGGCAGG CCGGTCTCTA TTATTTCCGC
GAGAAGAACA GCACCGTGTC GCTGTTCCGC GACTTCCGCG TGCCGGGCCA GTTCCCGACC
CCGGCCGCCT GCCTGTGCGA ACCCGGCGTC GAGCTTCAGA TCTTCCGCAA GCCCGACCTG
CTGCTGCAGT CGAAGGCGGT GTTCGGCCAG GCCTCCTATG CCATCACCGA CCAGTTCCGG
CTCGAAGGCG GCGCGCGCTA TTCGTCGGAC AAGAAGCACA ATCTCAGCGC GACCAACATC
GCGACCAACG TCAACACCTA TATCAACACC GGCGCGATCA ACTATGTGAA CAATCCGCCG
AGCGCGGTCC GCCTTTCCTC GCACCGGACG ACCTTCCACG CCGCCGCCAA TTATCAGTGG
ACGCCGCGCA ACCTGCTCTA CGCGAAGTTC GATACCGGCT ATAAGTCGGG CGGCTTCACC
GACCTGCAGG TCTATGGTCC CGAGAACATC AAGGCCTGGG AAATCGGCTC GAAGAACCGT
TTCCTCAACA ACACGCTCCA GGTGAACCTG TCGGCCTTCC TGTACAAGTA CAAGGACCAG
CAGGTGCAGC AGCAGATCAC CCTGCCGAGC GGCGGCATCG GCACCGGCAC GGTCAACGCC
GGCGCATCGA AGCTCTATGG CGGCGATGTC GACATCGTCT ACCAGGTCAC CCCCAACGAT
CGCATCGAGC TGTTCGGCGC CTATCTGCAC GCCCGCTTCA CCGACTTCGT CGCGGTCGTC
AACGGCGCCA ACAAGCAGCT CGCCGGCAAC CGGCTGCAGC AGGCGCCCGA CTGGGTGTTC
AACGCCGGCT ATGAGCATGT CTTCCCGGTC GGCGACGGAT CGATCACGAC CCGTCTCCAG
ACGCATTATG AGAGCAAGTC CTACTTCACC TTCACCAATT ACGGAGCCGA CAAGCAGCCC
GGCTACATGC GGTCGGACAT CATCGTCACC TACGCCGCGC CGGACGATCG CTGGCGGCTC
GAAGGCTACG TCCGCAACCT CGAGGACAAG CTGATCTTCA GCAATGCCGA CGTGGTCAGC
ACCACCTATG TCAGCTACCG TTACCAATAT CAGGCGCCGC GGACCTATGG TGCGCGCCTG
ACGGTCAACT TCTGA
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| Protein sequence | MREISRARVI GMLLAGASLS AVPAHAQDAT SPAAEASQGG LADIVVTAEK RPSIAQRAPI
ALSVVTSEAI KRQGVGNVAD LTTLTPSVGF SQNGANTVIT VRGVSSRDTN QLGDPAVSIS
LDGFYFQRSL GLNIALFDLE RVEALRGPQG TLLGRNATGG ALNIITAKPT DSFSAALTGE
VGNYDLIATQ GYVNIPVSDK VKLRAAFMTR DRDGYRHNAP ARDGDDDHSR AARLHLLFQP
TDRWDILLTG EYSHQDGVGP VIQPVAHRFL PNGQLDTSRV DIPGDGKRFA VPSGGFIRLN
SYNFRWNTNY DLDFATLTYL GGYRSLKYAN VRTLGADYAT NRRNFTFDQH ERPRSWNHEL
RLSSKSDTPL IWQAGLYYFR EKNSTVSLFR DFRVPGQFPT PAACLCEPGV ELQIFRKPDL
LLQSKAVFGQ ASYAITDQFR LEGGARYSSD KKHNLSATNI ATNVNTYINT GAINYVNNPP
SAVRLSSHRT TFHAAANYQW TPRNLLYAKF DTGYKSGGFT DLQVYGPENI KAWEIGSKNR
FLNNTLQVNL SAFLYKYKDQ QVQQQITLPS GGIGTGTVNA GASKLYGGDV DIVYQVTPND
RIELFGAYLH ARFTDFVAVV NGANKQLAGN RLQQAPDWVF NAGYEHVFPV GDGSITTRLQ
THYESKSYFT FTNYGADKQP GYMRSDIIVT YAAPDDRWRL EGYVRNLEDK LIFSNADVVS
TTYVSYRYQY QAPRTYGARL TVNF
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