| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1872 |
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| Symbol | |
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| ID | 5199523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2097540 |
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| End bp | 2098499 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640581417 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001262370 |
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| Protein GI | 148554788 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGGA TATTGCTGAC CCGGCGTTGG CCGGAGGCCG TCGAGGAGGA ACTGGCGGCG
CGCCACGACC TGCACCGCAA CGAGAGCGAC CGGCCGATGA GCCGGCAGGA GCTGGCGGAG
GCGATCCGCG CCTTCGACGT CGTCTGCCCC ACCGTCTCCG ACCGGATCGA CGCCGAGGTG
ATCGGCCGGG GCGGCGGCGC GCGCATCCTC GCCAATTACG GCGCGGGGAT CGAGCATATC
GACCTTGCGG CGGCGCGCGC GGCCGGGATC GCCGTCACCA ACACCCCCGA CGTGCTGACC
GACGCCACCG CCGAACTGGC GGTGCTGCTG ATGCTGATGG TCGCCCGCCG CGCCGGCGAG
GGCGAGCGCG AGCTGCGCTC CGGCGGCTGG ACGGGCTGGC GGCCGACCCA TCTGCTCGGC
CGGTCGATGC AGGGCCGGAC GCTGGGCCTG ATCGGCTATG GCCGGATCGC GCAGGAGACC
GCGCGGCGCG CGCAGGCGGC GCTCGGCGTG CGGCTGGCCT ATCACAGCCG CCGTCCGCTC
GATCCGGCGT CCGATCCGCT CGACGCGCGC TATTGCGCCT CGGTCGCCGA TCTGGTGGCC
GAGGCGGACA TCGTCTCGCT CCATTGCCCG GGCGGGGCCG AGACCCATCA TCTGATCGAC
GCCGCGATGC TCGCGCGGAT GAAGCCCGAC GCGGTGCTGA TCAACACCGC GCGCGGCACC
GTGGTCGACG AGGCGGCGCT CGCCGAGGCG CTGGCGCAGG GCCGGATCGG CGGCGCCGGG
CTCGACGTCT ACCAGGGCGA GCCGGCGGTG AACCCGCTGC TGCTGGCGGC CCCCAATCTC
GTGCTGCTGC CGCATCTCGG CAGCGCGACG ATCGAGACGC GCGAGGCGAT GGGGCGCCAG
GCGGTGCTCA ACCTCGAAGC GCTGCTCGAC GGCCGCGAGC CGCCCAACCG TGTCGCCTGA
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| Protein sequence | MARILLTRRW PEAVEEELAA RHDLHRNESD RPMSRQELAE AIRAFDVVCP TVSDRIDAEV
IGRGGGARIL ANYGAGIEHI DLAAARAAGI AVTNTPDVLT DATAELAVLL MLMVARRAGE
GERELRSGGW TGWRPTHLLG RSMQGRTLGL IGYGRIAQET ARRAQAALGV RLAYHSRRPL
DPASDPLDAR YCASVADLVA EADIVSLHCP GGAETHHLID AAMLARMKPD AVLINTARGT
VVDEAALAEA LAQGRIGGAG LDVYQGEPAV NPLLLAAPNL VLLPHLGSAT IETREAMGRQ
AVLNLEALLD GREPPNRVA
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