Gene Swit_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1862 
Symbol 
ID5200005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2085315 
End bp2086064 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID640581407 
Producthypothetical protein 
Protein accessionYP_001262360 
Protein GI148554778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.530634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC AGGTGGCGCT GTTGAAGGCC CGCGCGGGAA TCGCGCGCGG CGAGCTGATC 
GACCGTTACG AGCGCGAGCA TGCGCCGCTG GTGTCCTTGC TGCTGCCCCA TTTCAGCGAC
TATCGCCGCA GTTACGTCGT GCCCGGCTCG CTGATGGGCG GGGCCGCCGC GGCGCTCGAT
TTCGACGTCG TCACCGAGCT CTGGTACGAG GATGCGGACC AGCTCGCCAG GCTCGCCCGC
GCTGGCGAGG ATGCGGAATC GGTGCGGGTG AGCGAGGCCC GGCTGTTCGA TCCGGCGGCG
AGCATGGTCG TCACCTGCGA CGAGTTCGTC ACCCCGGGCA GCCGCCTCCA GCCGCGTCCC
GCCGGCCATG ACGGACGTCC GGCGATCAAG CTGATGGGCT TCCTGCGCAA GCGCGCCGAC
ATGTCGCGCG AGGCGTTCGT CGCGCGCTAC GAGCAGGGCC ATTGCGCCGT TGCGCTCGAC
GTCCTCAAGA AGGGCGATCA CCCGGTCTTC GCCGATTACC GCCGCACCTT CGCGCGGGAC
GAAGGGGGCT CGTCACCGCC GTTCGACGTG CTCACCGAAG CCTGGTTCTG GACCGAGGAG
GACTATCGCC ACTTCCTGGC GCTGCACGCC GACCCGAGGA TCGGCGCGAT CCTGGCGGAG
GACGAGGCGG CGCTGTTCGA TCGCGCCTCG ATCACGATCT TCGCGGCGGA CGAGCATATC
TCCGCCCCCG CCGCTCAGCC GATCCTGTAG
 
Protein sequence
MIKQVALLKA RAGIARGELI DRYEREHAPL VSLLLPHFSD YRRSYVVPGS LMGGAAAALD 
FDVVTELWYE DADQLARLAR AGEDAESVRV SEARLFDPAA SMVVTCDEFV TPGSRLQPRP
AGHDGRPAIK LMGFLRKRAD MSREAFVARY EQGHCAVALD VLKKGDHPVF ADYRRTFARD
EGGSSPPFDV LTEAWFWTEE DYRHFLALHA DPRIGAILAE DEAALFDRAS ITIFAADEHI
SAPAAQPIL