Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1862 |
Symbol | |
ID | 5200005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2085315 |
End bp | 2086064 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640581407 |
Product | hypothetical protein |
Protein accession | YP_001262360 |
Protein GI | 148554778 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.530634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGC AGGTGGCGCT GTTGAAGGCC CGCGCGGGAA TCGCGCGCGG CGAGCTGATC GACCGTTACG AGCGCGAGCA TGCGCCGCTG GTGTCCTTGC TGCTGCCCCA TTTCAGCGAC TATCGCCGCA GTTACGTCGT GCCCGGCTCG CTGATGGGCG GGGCCGCCGC GGCGCTCGAT TTCGACGTCG TCACCGAGCT CTGGTACGAG GATGCGGACC AGCTCGCCAG GCTCGCCCGC GCTGGCGAGG ATGCGGAATC GGTGCGGGTG AGCGAGGCCC GGCTGTTCGA TCCGGCGGCG AGCATGGTCG TCACCTGCGA CGAGTTCGTC ACCCCGGGCA GCCGCCTCCA GCCGCGTCCC GCCGGCCATG ACGGACGTCC GGCGATCAAG CTGATGGGCT TCCTGCGCAA GCGCGCCGAC ATGTCGCGCG AGGCGTTCGT CGCGCGCTAC GAGCAGGGCC ATTGCGCCGT TGCGCTCGAC GTCCTCAAGA AGGGCGATCA CCCGGTCTTC GCCGATTACC GCCGCACCTT CGCGCGGGAC GAAGGGGGCT CGTCACCGCC GTTCGACGTG CTCACCGAAG CCTGGTTCTG GACCGAGGAG GACTATCGCC ACTTCCTGGC GCTGCACGCC GACCCGAGGA TCGGCGCGAT CCTGGCGGAG GACGAGGCGG CGCTGTTCGA TCGCGCCTCG ATCACGATCT TCGCGGCGGA CGAGCATATC TCCGCCCCCG CCGCTCAGCC GATCCTGTAG
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Protein sequence | MIKQVALLKA RAGIARGELI DRYEREHAPL VSLLLPHFSD YRRSYVVPGS LMGGAAAALD FDVVTELWYE DADQLARLAR AGEDAESVRV SEARLFDPAA SMVVTCDEFV TPGSRLQPRP AGHDGRPAIK LMGFLRKRAD MSREAFVARY EQGHCAVALD VLKKGDHPVF ADYRRTFARD EGGSSPPFDV LTEAWFWTEE DYRHFLALHA DPRIGAILAE DEAALFDRAS ITIFAADEHI SAPAAQPIL
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