| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1722 |
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| Symbol | |
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| ID | 5197960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1923654 |
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| End bp | 1925957 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640581270 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262223 |
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| Protein GI | 148554641 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAATA TCAACCGGAC ATATCTATCG ATAACCATGA TGTCGGTGCT GCTCTGCGGG
GCCTCGCAAG CAGCGATTGC CCAACAGGCC GCGGTGGATG CCCAGAATTC CGGCGATATC
ATCGTCACCG CGCGCATGAG ATCGGAAGCG CTGCAGAATG TTCCTGCATC GCTCAGCGTC
TTTTCTTCGA AGCAGATAGA AAACGCGAAG ATCGAGCGGC CCGGCGATTA TATCGCGCTG
ACGCCCAACG TCACCTTCTC GACCGCGCAG GATGCCGGCA CCACCTATCT CACCGTGCGC
GGCATCAGCC AGGTGCCCAA TGGCGAGACC CCGGTCGCGA TCTCGGTCGA CGGCGTGCTG
CAGACGAGCG CGTTCCAGTT CAACGAGGAA CTGTTCGACA TCCAGCAGAT CGAGGTGCTG
AAGGGGCCGC AGGGCGCGCT CTACGGCCGC AACGCCATCG CCGGCGCGAT CAACATCACC
ACCAAGCCCG TCACCAACGA TTATGAGGGC CGCGTCGCCT TCGGCTATGG CAACGGCCAG
GCGACCCGCG CCGAAGGCTC GGTCTCGGGA CCGATCATCA AGGACAAGCT GCTGTTCCGC
GCGGGCGTCT CCTATCGCGA TGCCGACGGC TGGATCACCA ACCGCTTCCT CGACAGGAAG
GTCGACGACT TCCGCAACAT CGGCGCGGAC CTCAAGCTGA TCTACGAGGC GACCCCGGAC
CTGACCTTCG ACCTGCGCGG CCATTATGGA CGGATCACGG GCGGCGCGGC CTATTTCGTC
CGGTCGAGCA ACGCCGCCCA GCAGGGCGTC GTCATCACCG ATGCGCATGG CGTCGCCAAC
ACGGTGATCG CGCCGACCTC GAACAATCTC GGCTACAACA AGCGGCTGTT GAAGAACGTC
TCGTTCAAGA TCGACTATGA CACCGGCTTC GGCAGGCTTT CCTCGATCAC CGCCTATGAC
GCGATCGACC TGCTGACGAC GTTCGACGGC TATGATTATT CGGACAACCA GAACTGCTTC
GAGCTGACCT CGCCGCTGTC GACGCCCTAT GCCTGCGCCA ATCCGCAGAT CACCTTCGGC
GGCCTGAACG GCGGCACGCC CTTCTTCACG GCGCCGTTCA ACACCACCTT CCAGCGCTAT
CGCCAGCGCA ACTTCAGCCA GGAGCTGCGC TTCACCAGCC CGTCGGACCA GCCGCTCCGC
TATATCGCCG GCCTCTATTT CCTCCAGCGC AAGCGCGACC TCGTCACCGC GACGCAGGAG
GACAAGGGCT TCGGCATCGT TCCCGAACTC GATTTCGATC CGGCGACGGC CAACCAGACG
CGCGCCTATT TCGAAGAGCA CAACAACGAC AAGGCCTATG CCGCCTTCGC CCAGGCGAAC
TACGACGTGA CCAAGACGAT CGAGCTGTCC GCGGCGATCC GCTACGACAC CGATCACCGC
CGGCAGACCG ATCCGCGACC CGACATCTAC CGGCTCGACG GCCTCGGCCG GCCGATCACG
GGGCCGCGCA CCCGCAAGCA GAATTTCGAC GCGTGGCAGC CCAAATTCAC GATCAACTAT
CGCCCGCTGC GGACCTTCTC GATCTACGCC AACTATGCGA AGGGCTTCCG CTCGGGCGGC
TTCAACGCCG CCGGCACCGA GCTCGATCCC TCGACCGGCG CGAAGGTGGC CGATCCGATC
TTCAAGAAGG AGATGTCGGA GACCTACGAG GTCGGCTTCA AGAGCGAGCT GCTCGATCGC
GCCCTCTCGA TCAGCGGCGC GCTGTTCCAG ACCGATGCGA AGAACCTGCA GGTGTTCAAC
TTCAACGGCG TCGTGAACGC GCAGGTCGTC AACAATATCG ACAAGGCGCG GATCAAGGGC
GCCGAGCTCG AGGTGCAGGC GAGGCTGCCC GAGGGCTTCG CCCTGTTCGG CGGCCTCGGC
TATACCGACA CCAATATCCG GAAATATGAC GCCAATCCGA CGACCGTCGG CAACCAGCTA
CCCAACACCA CCAAGTTCAA GACCAACATG TCGCTGCAAT ATACGCGCGA CATCGGCACG
TCCGAGCTGC TGATCCGCGG CGACTGGGAG CATCGCGGCA AGACCTATTT CCACGAGGGT
GGCACCCCGA TCGGCATACC GATCCGCGAC CCGCTCGACC TGTTCAACGG CCAGGTCAGG
CTGACCCTCG CGAGCGGCTG GAGCGCGTCG CTGTGGGGCA AGAACCTCTC GAACAAGAAA
TATTACGATA AGGTCGTGGT GCCCGACTAT AATTTCCAGG CTCGGCCCCG CAGCTATGGC
ATCGACATCA CGAAGACTTT TTGA
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| Protein sequence | MININRTYLS ITMMSVLLCG ASQAAIAQQA AVDAQNSGDI IVTARMRSEA LQNVPASLSV
FSSKQIENAK IERPGDYIAL TPNVTFSTAQ DAGTTYLTVR GISQVPNGET PVAISVDGVL
QTSAFQFNEE LFDIQQIEVL KGPQGALYGR NAIAGAINIT TKPVTNDYEG RVAFGYGNGQ
ATRAEGSVSG PIIKDKLLFR AGVSYRDADG WITNRFLDRK VDDFRNIGAD LKLIYEATPD
LTFDLRGHYG RITGGAAYFV RSSNAAQQGV VITDAHGVAN TVIAPTSNNL GYNKRLLKNV
SFKIDYDTGF GRLSSITAYD AIDLLTTFDG YDYSDNQNCF ELTSPLSTPY ACANPQITFG
GLNGGTPFFT APFNTTFQRY RQRNFSQELR FTSPSDQPLR YIAGLYFLQR KRDLVTATQE
DKGFGIVPEL DFDPATANQT RAYFEEHNND KAYAAFAQAN YDVTKTIELS AAIRYDTDHR
RQTDPRPDIY RLDGLGRPIT GPRTRKQNFD AWQPKFTINY RPLRTFSIYA NYAKGFRSGG
FNAAGTELDP STGAKVADPI FKKEMSETYE VGFKSELLDR ALSISGALFQ TDAKNLQVFN
FNGVVNAQVV NNIDKARIKG AELEVQARLP EGFALFGGLG YTDTNIRKYD ANPTTVGNQL
PNTTKFKTNM SLQYTRDIGT SELLIRGDWE HRGKTYFHEG GTPIGIPIRD PLDLFNGQVR
LTLASGWSAS LWGKNLSNKK YYDKVVVPDY NFQARPRSYG IDITKTF
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