Gene Swit_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1711 
Symbol 
ID5198737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1912698 
End bp1913426 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content72% 
IMG OID640581259 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001262212 
Protein GI148554630 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGGG AGCTTGTCGT CTCCCGTTCG GGCGAGGTCC ACCGGCTGAC ATTGAACCGA 
CCCGGCAAGG GGAACAGCCT TTCGGCCGAC CTGGTCGAGG CGCTTCACGA CAGCCTCGAC
GCGGTCGAAC AGGCCAAGGG GCGCGTGCTG ATCCTGCAGG GCGAGGGCCG CAATTTCTGC
ACCGGCTTCG ACCTCGGCGA TCTCGACGGC GCCAGCGACG GCGATCTGCT GTGGCGGTTC
GTGCGGATCG AGCAGCTGCT CGCGCGGCTG TGGCAGGCGC CGTTCGCCAC CATCGCCGTG
GGCAAGGGCA GGGTGTTCGG GGCCGGCGCC GACCTGCTCG TCGCCTGCGG GCGGCGCATC
GTTGTCGAGC AGGCGACGTT CAGCTTTCCC GGCGCCGGCT TCGGCTTGGT GCTCGGCACG
CGCAGGCTCG CTCATCGCAT CGGCGAGACG GCCGCGCAGC ATGTCGTCGC CAGCGGCGCA
GCGATCGCGG CGGAGGAGGC GGTCCGGCTG AACCTGGCGA CGGCCTGCGT CGCGGAGCCC
GACCTCCAGG CGACGCTCGA TCGCGAGGTC GCCGTGGCGA CGCGGCTAGA CCGGGAAACC
TACGCCGCGA TCGGCGAGGC GTCGGGATCG GACGCGGGCG CGCTCGATCG GGACCTGGCG
ATGCTCGTCC GCTCCGCCGC GCGTCCCGGC CTGCGGCAGC GGATCGAGGC CTACCGAGCC
CGAAGGTAG
 
Protein sequence
MTGELVVSRS GEVHRLTLNR PGKGNSLSAD LVEALHDSLD AVEQAKGRVL ILQGEGRNFC 
TGFDLGDLDG ASDGDLLWRF VRIEQLLARL WQAPFATIAV GKGRVFGAGA DLLVACGRRI
VVEQATFSFP GAGFGLVLGT RRLAHRIGET AAQHVVASGA AIAAEEAVRL NLATACVAEP
DLQATLDREV AVATRLDRET YAAIGEASGS DAGALDRDLA MLVRSAARPG LRQRIEAYRA
RR