| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1705 |
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| Symbol | |
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| ID | 5197494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1903736 |
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| End bp | 1904980 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581253 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001262206 |
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| Protein GI | 148554624 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.460049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCG CATATTGGGA CAATCAGGAT CGCCCGGCAA AGGGCGACGG TTTCTGGAGC
GCAGGGCACA AGCCCACGCT GATCGCGGCC TTTCTCTATT TCGACCTGGC CTTCATGGTC
TGGGTGATGC TCGGCCCGCT CGGCCCCGAC ATCGCCGCGT CGCTCGGCCT CACCCCCGCG
CAGAAGGGGC TGATGGTCGC GACACCGACC CTGGCGGGCG CGATCCTGCG CGTCGTCAAC
GGCCTGCTGG TCGACCGGAT CGGGCCGAAG CGCTCGGGCG CGATCAGCCA GCTCATCGTC
ATCGCCGGCC TGTTCACGGC CTGGATGACG GGCGTGACCA GCTTCGCAGG TACGCTCGCG
CTCGGCGTCG TCCTCGGCTT CGCCGGGGCA AGCTTCGCGA TCGCGCTGCC GCTCGCCAGC
CGCTGGTATC CGCCAGAGCA TCAGGGCAAG GCGATGGGCA TCGCCGGCAT GGGCAATTCG
GGCACCGTGC TCGCGGCCTT GTTCGCGCCG GGCCTCGCGC ATCTGTTCGG CTGGAACGCG
GTGCTGGGCC TCGCCTGCAT CCCGCTGGCC CTGGTCTTCG TCGCCTATAT GCTGATGGCG
AAGGACGCGC CGGGGGCTCC CGCGCCGAAG AAGCTCGCCG CCTATCTCGA ACCACTCGGG
ACCGCCGACG CCTGGTGGCT GATGCTGTTC TACGGCGTCA CCTTCGGCGG TTTCGTCGGC
CTCGCCGCGT CGCTGCCGAT CTACTTCACC GACCAGTTCG GGCTGAGCCC GGTGATGGCC
GGCTATTGCA CGGCAGCCTG CGTCTTCGCC GGATCGTTGG TCCGCCCGCT CGGCGGCGCG
CTGGCCGATC GGATCGGCGG CGTGCGGGCG CTGTCGATCG TCTATCTGGT CGCGGCGGCG
GCGCTCGCCG GGGTCAGCGC GACGCACATG ATCGGGGCGG CGCTCGCCAC CTTCGTCGTC
GCGATGCTCG CGCTCGGCAC CGGCAACGGA TCGGTGTTCC AGCTCGTCCC GCAGCGCTTC
CGGGCCGAGA TCGGCGTGAT GACCGGCCTG GTCGGCATGG CGGGCGGCAT CGGCGGCTTC
TACCTGTCCT CCTCGCTCGG CTTCGCCCGG CAGCTCAGCG GCAGCTACCA GCCCGGTTTC
CTGATCTTCG CCGGCCTGTG CCTGCTCGCC TTTGCAGCAC TCGCCGGAGT CAAGCGCCGC
TGGCGTCGCG ACTGGGACGC CGCGAAGGCC GGCGTCCGCA TCTGA
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| Protein sequence | MATAYWDNQD RPAKGDGFWS AGHKPTLIAA FLYFDLAFMV WVMLGPLGPD IAASLGLTPA
QKGLMVATPT LAGAILRVVN GLLVDRIGPK RSGAISQLIV IAGLFTAWMT GVTSFAGTLA
LGVVLGFAGA SFAIALPLAS RWYPPEHQGK AMGIAGMGNS GTVLAALFAP GLAHLFGWNA
VLGLACIPLA LVFVAYMLMA KDAPGAPAPK KLAAYLEPLG TADAWWLMLF YGVTFGGFVG
LAASLPIYFT DQFGLSPVMA GYCTAACVFA GSLVRPLGGA LADRIGGVRA LSIVYLVAAA
ALAGVSATHM IGAALATFVV AMLALGTGNG SVFQLVPQRF RAEIGVMTGL VGMAGGIGGF
YLSSSLGFAR QLSGSYQPGF LIFAGLCLLA FAALAGVKRR WRRDWDAAKA GVRI
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