| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1688 |
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| Symbol | |
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| ID | 5199222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1880202 |
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| End bp | 1882526 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640581236 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262189 |
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| Protein GI | 148554607 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTTT CCTCGAAGCT GATGTTGAGT GCCACGACCG CACTGGCTCT TCTTCCCTCC
GCCGGCGCGC TTGCGCAGAA GGCCGGCCCC GCTGCCGTCG AAGCCGCCCC GGCCGAAGCG
GCGCCGCGGA CGTCCGACGC GGAGATCGTC GTCACCGCGC AACGCCGCCA GCAGCGGCTT
CTGGACGTTC CGATCAGCGT GTCGGCCTTC TCGGCATCGA TGATCGAAAA GGCCCACATC
ACGGAGGCCA AGGACTATCT GGCGCTGGCC CCGAACATCA GCTTCACCGA GGATGGAGAG
AAGGGCAACC GCTCGATCAA CATCGCGATC CGCGGCGTCA GCAACGTCGA CCTCGGCGAG
CAATCGACCC AGCAGTCGAT CGGCTATTAT ATCGACGAGC TGAGCACCGG CTCGTCCGCC
AACGGCACGC TCAACCCGCA GCTCCTCGAC ATCGAGCGGA TCGAGGTGCT GCGCGGTCCG
CAGGGCACCT ATTTCGGCCG CAACGCCTCG GGCGGCGCGA TCAACATCAC CACCAAGAAG
CCGACCGACT CGCTCTATGC CGAGGGCGGC CTCGAATATG GCCGCTTCGA CACGCAGAAG
GTCTACGGCA TCTTCAACGC GCCGCTGGCC TCCAACCTGT TCTTCCGTGG TCTCGCCTCC
TATGAGAAGA GCGACGGCCT CATCCGCAAC CTCGATCCGC GCGGGACGCC GAACAGCGGC
TACAAGAATC TCCACCTTCG GGGCGCCGTG CGCTTCGTCC CGACCGAGAA TCTGACCTGG
GATCTGTCGG TCGACTATGC GCGGGACCGC AACGGCATGG ATGCGACGGT GCCGTCGGGC
GTGCTCGACC TCGACACCAA GAGCATCTTC GGATCGGATT TCCAGGCGAT CGACGAAGGC
GAGGGCTTCT ATCCCGCCAA CCAGCGCAAC GTCCGCCACA ACACCCGCGA ATGGAACAAC
AACAGCGCGA CGATCATCAA CAACCGGCTG ACCTGGAAGG GCGACGATTT CTCGATCCAC
TCGATCACCG GCTATATCGA CAGCAGCAAC AGCCGTCAGT TCGACCAGGA CAATATCTCG
GTCGACGCCC TCTATCGCCA CAACCGCAAC AGCGGACGGT CCTTCAGCCA GGAACTGCGC
GTCCAGTCGG AAGGGACGAC GGCGATCGAA TGGGTGGTGG GCGGCCTGTA CGCCAATGAC
CGCATCCGCC AGTTCAACAG CATCCGCGCC GGCACGGAAA CCAGCTACAC CTATCCCGAC
GGCACGGTGA TCGGCCTGCT GCCGCCGATC CCGCCGGAGT TCCGGGTCAA CGAGAACAAC
AAGATCTTCA AGACGGAAAG CATCGCGGCC TTCGCCGATG CGACCTGGCA TGTCTCGTCG
AAGGTCGACC TCGTCGCCGG CGGCCGCTAC ACGCACGACA AGATATCGAA CCGCAACTTC
GGCGTGGTGG CGTTCGAATC CCCCGTTCCG GACATCGCGG GAAGCAAGAG CTTCTCGGAC
TTCTCGCCGC GCCTGCTCGC GCGCTTCAAG TTCAACCGCG ACAACAATGT CTACGCCTCG
GTGTCCAAGG GATACAAGGC CGGCGGCATC GACATCAATT CGGGGTTCGC TTCGCCATTC
AGGCCCGAGA CCCTCTGGAA CTACGAAGTC GGCCTGAAGG GCGACCTGCT CGATCATAGC
GTGCAATATG GCCTGTCCTT CTTCTACCTG AAGTGGAAGG ACCTGCAGGT CCAGACGAAC
TATCTCGCCA TTCCGGGCGA CATCAGTTCC GCGACCGAGC TGACGCTGAA TGCGGCGCGG
GCGACGAACA AGGGTTTCGA GTTCGACGTC CACGCCCGGC TTTCGTCGAC CCTGCGCTGG
AACGCCGCGT TCGGCTATCT CGACAGCACG TTCAAGAGCT TCCCCGACGC GGTCCTGGCG
GGCGGCAACC AGGTCGACCT GACGGGCTAT CGCCTGCCGA AGACGCCGCG CTACACGATC
AGCACGTCGC TCGACTATGA CGCGGAAGTG GCCGACGGTG TCAGCCTCTA CCTGCATCCG
GAGATCAACT TCCGCTCGGC GGCGCCCGGA GACCTGGAAG GCGTCGCGGC GGTTCCGCTG
GCCCTTCCGA GCTTCCCCTA TCAGCCCAAG GCCTATGCCG TCGTGAACAT GTTCGGCGGC
GTCCGCTTCG GCCGGTTCGA GATCGGCGGA TATGTCAACA ACCTGTTCAA GGAAGACTAT
TACACCGGCA CCGCCGACAA TTTCGGCCTG GGCGGCATCC GCCTCCGTCC GCACCCCCGG
ACGTTCGGCG CGACCGCCAA GGTGAAGTTC GGCGCCGACG GATGA
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| Protein sequence | MMFSSKLMLS ATTALALLPS AGALAQKAGP AAVEAAPAEA APRTSDAEIV VTAQRRQQRL
LDVPISVSAF SASMIEKAHI TEAKDYLALA PNISFTEDGE KGNRSINIAI RGVSNVDLGE
QSTQQSIGYY IDELSTGSSA NGTLNPQLLD IERIEVLRGP QGTYFGRNAS GGAINITTKK
PTDSLYAEGG LEYGRFDTQK VYGIFNAPLA SNLFFRGLAS YEKSDGLIRN LDPRGTPNSG
YKNLHLRGAV RFVPTENLTW DLSVDYARDR NGMDATVPSG VLDLDTKSIF GSDFQAIDEG
EGFYPANQRN VRHNTREWNN NSATIINNRL TWKGDDFSIH SITGYIDSSN SRQFDQDNIS
VDALYRHNRN SGRSFSQELR VQSEGTTAIE WVVGGLYAND RIRQFNSIRA GTETSYTYPD
GTVIGLLPPI PPEFRVNENN KIFKTESIAA FADATWHVSS KVDLVAGGRY THDKISNRNF
GVVAFESPVP DIAGSKSFSD FSPRLLARFK FNRDNNVYAS VSKGYKAGGI DINSGFASPF
RPETLWNYEV GLKGDLLDHS VQYGLSFFYL KWKDLQVQTN YLAIPGDISS ATELTLNAAR
ATNKGFEFDV HARLSSTLRW NAAFGYLDST FKSFPDAVLA GGNQVDLTGY RLPKTPRYTI
STSLDYDAEV ADGVSLYLHP EINFRSAAPG DLEGVAAVPL ALPSFPYQPK AYAVVNMFGG
VRFGRFEIGG YVNNLFKEDY YTGTADNFGL GGIRLRPHPR TFGATAKVKF GADG
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