Gene Swit_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1670 
Symbol 
ID5200377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1856245 
End bp1857174 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content71% 
IMG OID640581218 
Productalpha/beta hydrolase domain-containing protein 
Protein accessionYP_001262171 
Protein GI148554589 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCG ATCCGCAGCT CGCCGCCCTG CTGGCGGCGC CGGCCGATGA TGCAGCTCCG 
CCGGCCTCGT TCGCCGAGCG GCGCGCGCTC TTCGCTTCGG AGCTTGCGGC GATCGATCGG
CCAGGCCCCG CGATCGCCCA GGAACATGCG ATCACGCTCT CCACGCGGAA CCGTCCGCTG
GACGCCCGCC TTTTCCGTCC CGCGATGCCG GCGTCCTCGA ACCGTCCCGT CATGCTCTTC
TTCCACGGCG GCGGCTGGAT CCAGGGCAGC AGCGCGACCC ACGCCTCCTT ATGCCGGCAT
CTCGCGCATC ATGGTGGGTT CGACCTGTTG TCGGTCGACT ATCGGCTCGC CCCCGAGCAC
CCCTTCCCCG CCGCCTTCGA GGATGCGCTC GACGCGCTCC GCTGGCTGTA CGAGGACGGC
GCCGGCGCGG AATTGCATTC CCCCGACATC GTCGTCGCGG GAGACAGCGC CGGCGGCAAT
CTCGCGGCGG CCGTCTGCCT GGCCGCGCCC GGCGAGGGCC TCCCCGCGCC GCAGGCCGCG
CTATTGCTCT ATCCCGCGCT CGACCTGGCG AACCGGACAG GCTCGCGCGA GACGTTCGGC
CGGGGCTATT GGCTCGATAC GCTGGACGAA CTGATCGCCC ATTATGTGCC GACGCCCGCG
CAACGCCTGG CCGCCGAGGC ATCGCCCGCG CTGGCGCCGA CGCTGGCCGG CTTTCCGCCG
ACGATGCTGG TGACCGCCGG CCATGATCCC CTCCGTGACG AAGGCATCGC CTTCGCGGTG
CGATTGATGG CGGACGGAGT CCGCTGCACG CTCGCGAACG AGGCGTCGAT GATCCACGGC
TTCCTGTCCC TCCACGGCGC GATACCCGCG GCCGAACGCC GGCTGATCGC GATCGCGCAG
CAGTTCGGCC GGTTCGTTCG GGCGGATTGA
 
Protein sequence
MPLDPQLAAL LAAPADDAAP PASFAERRAL FASELAAIDR PGPAIAQEHA ITLSTRNRPL 
DARLFRPAMP ASSNRPVMLF FHGGGWIQGS SATHASLCRH LAHHGGFDLL SVDYRLAPEH
PFPAAFEDAL DALRWLYEDG AGAELHSPDI VVAGDSAGGN LAAAVCLAAP GEGLPAPQAA
LLLYPALDLA NRTGSRETFG RGYWLDTLDE LIAHYVPTPA QRLAAEASPA LAPTLAGFPP
TMLVTAGHDP LRDEGIAFAV RLMADGVRCT LANEASMIHG FLSLHGAIPA AERRLIAIAQ
QFGRFVRAD