| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1642 |
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| Symbol | |
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| ID | 5200043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1827022 |
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| End bp | 1827975 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581190 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001262143 |
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| Protein GI | 148554561 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.881641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0688887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATGACG CTCCCGACCA GTCGTTCCCC GTCCGGATAG CGTCGCTCGT CCCGCTGGCG
CCCATCGCGC GCGCCGAATT CGCACGGCGC TTCATCATCG AAGACGCGGA ACCGGCATCG
CTCGGCACGC TTTGCCCGGA TGTCCTGCTG CTGAGCCCGG CCGTGCGGGT GGATGCGGCC
TTCCTTGCAG GCCTTCCCGC CTCGGTGGGC GCGCTCGCGA CCTATTCGGT CGGCCTCGAC
CATATCGATC TCGACGCGGT CCGTGCGCGC GGCCTGCCGA TGTTCAACAC GCCCGGCATC
CTCTCGAATG CGGTGGCCGA TCAGGCGATG TTGCTGCTGT TGGCCGCGAC GCGGCGGATG
GCCGAGGCGA CCGCCCTGCT GCGCGAAGGC CGATGGACCG ACCTGTGGTC GAGCCACATC
CTCGGCGTCG AACTCGCGGG CAGGACGCTG GGCATCTACG GCCTGGGCGA CATCGGTCGC
AGGGTGGCAC GCCGGGCCAC GGCCTTCGGG ATGAGGCTGG TCTACCACAA CCGCAGGCGG
GCCGTGGATG AAGCCGGGGC CACTTTCGCC GCCACCGCGG AGGAATTTCT CGCCAGCGCC
GATATCCTCC TGCTCGCGGC CCCTTCCACG GGCGAGACGC GCAACTTCCT GAACCGCGAG
CGTCTCGCCC TGGCGCGCGA TGGACTGGTC GTCGTCAATA TCGGCCGGGG CGATCTGATC
GATGACGACG CGCTGCTGGA GGCGCTGGAG AGCGGGAAGG TTCGGGCGGC GGGCCTCGAC
GTCTTTCGCA ACGAACCGCA GATCGATCCG CGCTTCCTGG CCCGGTCCGA TGTGGTGGCG
ACGCCGCATA TCGGCAGCGC GACCGAAGAG GCGCGGCGGG GCATGGCGAC GGTGCTGTGC
GACGCGATCG AGGCGTGGCG ACGAGGCGAA CGCCCCGCCA ACCGGATCAC CTGA
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| Protein sequence | MNDAPDQSFP VRIASLVPLA PIARAEFARR FIIEDAEPAS LGTLCPDVLL LSPAVRVDAA
FLAGLPASVG ALATYSVGLD HIDLDAVRAR GLPMFNTPGI LSNAVADQAM LLLLAATRRM
AEATALLREG RWTDLWSSHI LGVELAGRTL GIYGLGDIGR RVARRATAFG MRLVYHNRRR
AVDEAGATFA ATAEEFLASA DILLLAAPST GETRNFLNRE RLALARDGLV VVNIGRGDLI
DDDALLEALE SGKVRAAGLD VFRNEPQIDP RFLARSDVVA TPHIGSATEE ARRGMATVLC
DAIEAWRRGE RPANRIT
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