| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1631 |
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| Symbol | |
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| ID | 5198898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1813444 |
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| End bp | 1815744 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640581179 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262132 |
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| Protein GI | 148554550 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.888347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGGA CGCGAATCTC AGTCGAACGG ATGTGTCGGG TGACCCGTTA CGGACGGGCC
CTGCCGGCAT CGGACGGATT TCGGCCGGCC CGCCATGGCG CTTCCCATCG ATTTGATTTT
ATCAGGGTTG GAAAGGGGAA CCTTATGAAG AGCTTCAAGT CGTTCGGCGG CAAGCGCGGC
CTGCTCGCGG GCGCCGCGAT GGTGATGGCG GTGGTGATGC CGGGGGCCGC GATGGCCCAG
GAAGCCGCCG CTGTCGACGA GGGCGGCATC GGCGAGATCG TCGTGACCGC AGAGAAGCGC
GAGACGACCG TCCAGAAGAC GCCGATCGCC GTCTCCGTCC TGGATGCGGA CGCGATCCGG
CGGAACGGGG TGAACAGCCT GGTCGATCTG TCGTCGCTGA CGCCGAGCCT CAACTTCGCG
CAGAATTCGG TCAATACGAT CATCACCATC CGCGGCGTTT CGAGCCGCGA CACCACCGAG
ATCGGCGACC CGGCGGTCTC GATCGCCACC GACGGCTTCT ATTATCAGCG CCCCTTCGGC
TTCAACGACA CGCTCTACGA CCTCGAGCGC GTGGAGGTGC TGCGCGGTCC GCAGGGCACC
CTGTACGGCC GCAACGCGAC CGGCGGCGCG ATCAACTTCA TCACCGCGAA GCCGGGCAAG
GAATTCGGCG GCTTCGCCAC GGTGGGCGTC GGCGACTATA ATCTCGTCAC CGCCGAGGCC
GCGGTCAACG TCCCGCTGGC CGACAATCTC CAGACCCGCG CGTCGGTCTA CATGCAGAAG
CGCGACGGCT ATCGGAAGAA CAACTATGCG GGCAAGGACG GCGACGATGC CGACGCCGTG
TCGGCGCGCT TCCAGGTCAA GTTCGACCCC ACCGAGCGCC TGTCCTTCCT GTTCTCCGCG
CAGACCACCA GCATCGGCGG CGTCGGCCCG ACCTTCTACG GCGTGCTGTT CAACGGTCCG
GTCAACAACA ATGTCCGCCC CGCGATCGAC CGCGACGGTT CCGTCCTCGG CTCGCCGCGG
CAGAGCATCG ACGGCACCAA CAAGTCGATC CAACTCACCG CGACCTATGA TTTCGGCATC
GCCACGCTCA CCTATCTCGG CGGCTTCCGG AACCAGAAAT ATCGCCAGGT GCGCGATCTC
GACGGCGTCG TGAAGTCCGA CGCCTATTTC CTGCCGAGCG AGGATGCCCG CGACTGGCAG
CATGAGGCGC GGCTGACCTC GAACGGCGAC GGCCCGTTCA AGTGGCAGGC CGGCGTCTTC
TATTTCCACG AGAAGAACAA CACCAACACC GACTTCTCCA GCTTCACCAA CCCGATCAAT
CCGGGCCAAC CGGTGGCGCG TTTCGCCTTC CGCTATCCGA GCGTGATCGC GCGATCGAAG
GCGGTCTTCG GGCAGGCTTC CTATGAGGTG GTTCCCGGCC TGTCGCTGGA GGCGGGCATC
CGCTACTCGA AGGACTACAA GGCGCGTCGC GGCTATTCCA ACACCACCGG CACCGCCTAT
ACCGGCATCG GCAACGTTCC GACCGACGTG AACGCGAGCA GCAGCAAGAC CACGACCCAT
TTCGCGGTGA ACTGGCAGTT CACCCCGCGC AACCTGCTCT ATGTGAAGCG CGATACCGGC
TACAAGGCGG GCGGCTTCAG CGACGTCCAG AATATCGGCA ACGTGCCCTA CGGCCCGGAG
AACATCACCT CCTACGAGAT CGGTTCGAAG AACCGCTTCC TCGACAACCG GTTGCAGCTC
AACGTCTCGG CCTATCGCTA CAACTACAAG GATCAGCAGA TCAGCCAGTT CAACAATGGC
TTCACCGCCA TTTTCAATGC CGGCAAGTCG CGGATCAAGG GTGTCGAGGT CGAGGCGGTG
GCGCAGCCGG TGCCGGCGCT GCGGTTCGAC GGATCGATCG CCTATCTGGA CGCGAAGTTC
ATCGATTTCC TGGTCAGCAA CGTCCAATAT GCCGGCAACA AGCCGCCGAG TTCGCCCAAA
TGGCAGCTGG GCGCCGGCCT CCAATATGAG CTCGCCCTGG GCGACGGCAC GCTGACCCCG
CGCGTCCAGA CCCATTATGA GAGCGAGTCC TATCTCGCCT TCACCAATTT CGAGCGCGAG
CGGAACCGCA AATTCTCGCG CACCGACCTG ATGCTGACCT ACAACGCCCC GGACAATCGC
TGGAGCCTGC AGGGCTATGT CCGCAACCTC GAGAACAAGA TCGTGATCAC GGCGGCATCC
GCCAGCGGTC TGTTCGGAGC CTATACCTAT CAGCTGGCTC CGCCGCGCAC CTATGGCGCG
CGGCTCACCT ACAACTTCTG A
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| Protein sequence | MNGTRISVER MCRVTRYGRA LPASDGFRPA RHGASHRFDF IRVGKGNLMK SFKSFGGKRG
LLAGAAMVMA VVMPGAAMAQ EAAAVDEGGI GEIVVTAEKR ETTVQKTPIA VSVLDADAIR
RNGVNSLVDL SSLTPSLNFA QNSVNTIITI RGVSSRDTTE IGDPAVSIAT DGFYYQRPFG
FNDTLYDLER VEVLRGPQGT LYGRNATGGA INFITAKPGK EFGGFATVGV GDYNLVTAEA
AVNVPLADNL QTRASVYMQK RDGYRKNNYA GKDGDDADAV SARFQVKFDP TERLSFLFSA
QTTSIGGVGP TFYGVLFNGP VNNNVRPAID RDGSVLGSPR QSIDGTNKSI QLTATYDFGI
ATLTYLGGFR NQKYRQVRDL DGVVKSDAYF LPSEDARDWQ HEARLTSNGD GPFKWQAGVF
YFHEKNNTNT DFSSFTNPIN PGQPVARFAF RYPSVIARSK AVFGQASYEV VPGLSLEAGI
RYSKDYKARR GYSNTTGTAY TGIGNVPTDV NASSSKTTTH FAVNWQFTPR NLLYVKRDTG
YKAGGFSDVQ NIGNVPYGPE NITSYEIGSK NRFLDNRLQL NVSAYRYNYK DQQISQFNNG
FTAIFNAGKS RIKGVEVEAV AQPVPALRFD GSIAYLDAKF IDFLVSNVQY AGNKPPSSPK
WQLGAGLQYE LALGDGTLTP RVQTHYESES YLAFTNFERE RNRKFSRTDL MLTYNAPDNR
WSLQGYVRNL ENKIVITAAS ASGLFGAYTY QLAPPRTYGA RLTYNF
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