| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1583 |
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| Symbol | |
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| ID | 5197926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1761370 |
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| End bp | 1763544 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581131 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262084 |
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| Protein GI | 148554502 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCA TCCTGACGAT GGGGCATTCG ATGCGGCGGG CGCTATGCTG CGCCTCGCTG
ATGGCGCTGT GCGCTCCGGC GGCGCATGCG CAGCAGGCCG CGGCCGGCGT CGCGACGGGC
GGCGACGGCG ACATCATTGT CACGGCGCGC AAGCGCGAGG AGACCCTGCT CGACGTGCCG
GTCGCGGTTT CGGCCTTCTC CGGCGTGAAG CTCGAAGCAT CCGGCATCGC CAATGTCAGC
AACCTGATCG GCGAGGTGCC CAGCCTGTTC ACCACGCAGA ACCAGACCTT CGGCCCCGCG
CCCAACCAGA CCTATCTGGT CCTGCGCGGC GTCGGCGCGA CCTCCTCGAA CGATCCGGCG
GTGGGCACCT TCCTCGACGG CGTCTATCAG ACCAGCCTGA ACTTCGATCA GGGCTTCCTC
GATCTCGAAC GGGTGGAGAT ATTGCGCGGC CCGCAGGGGA CGCTTTTCGG CCGCAACACC
CAGGGCGGCG CGCTGAATAT CGTCACCGCG AAGCCGGACG GGAATTTCCG GTTCAAGCTG
CAGGGCGAGG CGGCGGAATT CGACAGCTAC AAGCTCGGCG GCAGCGCCAG CGGGCCGGTC
GTCGAGGACA AGCTGTTCGC CGGCATGGCC GTGCAATATT CGCGGACCGA CGGCTATCTG
CACAATGTCA CGCTCGATCG GAAGCAGGAC AATTCGAACA AGCTCGCCGG CCGCTTCACG
CTGCGCGCGA CGCCCAGCGA CACGCTGGAG GTGATCCTCC GTATCGAAGG GTCGCGCTCG
CGCTACGGCT ATCTCGGCTT CGGCGTGCCG GATGACGGCA GCAAGCGCTA TGTCACCCTC
GACGGCGAGA AGCGGACCTC GCACGACCAT GGCTACGGCG GATCGCTGAC CGTCAATTAC
ACGTTCGACG GCGCGGTGCT GACCTCGATC ACCGGCGCCA GCAAGACCAA GTCGCGCTAC
TGGTTCGACT TCGATTCCGG GCCGGATCTG GGCAATTTCC AGGATCAGCG AACCAACCAG
TCGCTGGTGT CGGAGGAGCT TCGCCTCGCC TCGGACGGCA GCGGGCCGCT CACCTGGCTG
GCGGGCCTCT ATTATTTCGA CGAGACCCAC GATCAGGATC GCAATTTCGC GCAGGGCCAA
TGCTCGGCCT GCGTCTTCCC GCCGATCTTC GATCCGGCCA ATCGCGTCCT CGAACAGACC
AAGTTGTCGC GCGACGGCTG GGCGGCGTTC GGCCAGGCGA GCTATGATCT CGGCCGGCTC
GATCTGACGC TGGGCGCTCG CTATGCGCGG GAGACGTCGA AAGCCCATCA GGCGGGCCTG
ATCTTCCTGC CCGGCATCGG CGCCAATGAC AGCTTCGACG GCACCAACAA GGCGAGCTTC
AAGAATTTCT CGCCGATGGC GTCGCTGGCG ATGCACTGGA CCGACGACGT CATGACCTAT
GCGACCGTAG CGCGCGGCTA CAAGGCGGGC GGCTTCGACA AATATCCGGG CAGTTCGGCG
GCGGTCGGCA TCCCGTTCGG CAACGAAACC TCGCTCAACT ATGAGATCGG CACCAAGGGA
TCGCTGCTCG ATCGCAAGCT GACCTTCAGC CTCGTCGGTT TCCTGATCGA CATCCACGAC
CAGCAGCTCG CTTCGACCGT GATCAGCCCG ACCACCGGCG TGCCGGTCGG CGTCACCACC
AATGTCGGCA GTTCGCGCAG CAAGGGCGTC GAGTTCGAGC TTCAGCTACG GCCGGTCGCC
GGGCTGATGC TGCGCGGCAA CACCGCCTAT GTCGACGCCA AATTCCGCAA GATCACCAGC
CCGGTCGGAA CCCACCAGGT CGGCGACCGG CTGCCGTTCG TGCCGAAATG GACCGCCGCC
GCCGGGGGCG ACTACACGAT CGCGCTCAGC GACGCGTTGA AGCTGACGGG AAGCATCGAC
TATAGCTATG TCGGCAGCCA CTATATCGGC AACGGCGCGG CTCCGTTCGA CCCGATCCTG
CCGATCAAGT CCTATGACAG TGCCGACGCG CGACTGACGG TGGCCGGGGC CCGCTGGGAC
CTGACCCTGT TCGTCAACAA TGTCTTCGAC AGCTTCAACA TCACCCGCCG CTTCGCCCCT
GCCTTCCAGA CCTATACGCG GGCGACGGTG GCGCCGCCCC GCCAGTTCGG CGTCCGCGCC
GGTTTCCATT ATTAA
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| Protein sequence | MTSILTMGHS MRRALCCASL MALCAPAAHA QQAAAGVATG GDGDIIVTAR KREETLLDVP
VAVSAFSGVK LEASGIANVS NLIGEVPSLF TTQNQTFGPA PNQTYLVLRG VGATSSNDPA
VGTFLDGVYQ TSLNFDQGFL DLERVEILRG PQGTLFGRNT QGGALNIVTA KPDGNFRFKL
QGEAAEFDSY KLGGSASGPV VEDKLFAGMA VQYSRTDGYL HNVTLDRKQD NSNKLAGRFT
LRATPSDTLE VILRIEGSRS RYGYLGFGVP DDGSKRYVTL DGEKRTSHDH GYGGSLTVNY
TFDGAVLTSI TGASKTKSRY WFDFDSGPDL GNFQDQRTNQ SLVSEELRLA SDGSGPLTWL
AGLYYFDETH DQDRNFAQGQ CSACVFPPIF DPANRVLEQT KLSRDGWAAF GQASYDLGRL
DLTLGARYAR ETSKAHQAGL IFLPGIGAND SFDGTNKASF KNFSPMASLA MHWTDDVMTY
ATVARGYKAG GFDKYPGSSA AVGIPFGNET SLNYEIGTKG SLLDRKLTFS LVGFLIDIHD
QQLASTVISP TTGVPVGVTT NVGSSRSKGV EFELQLRPVA GLMLRGNTAY VDAKFRKITS
PVGTHQVGDR LPFVPKWTAA AGGDYTIALS DALKLTGSID YSYVGSHYIG NGAAPFDPIL
PIKSYDSADA RLTVAGARWD LTLFVNNVFD SFNITRRFAP AFQTYTRATV APPRQFGVRA
GFHY
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