Gene Swit_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1574 
Symbol 
ID5197742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1752455 
End bp1752628 
Gene Length174 bp 
Protein Length57 aa 
Translation table11 
GC content63% 
IMG OID640581122 
ProductXRE family transcriptional regulator 
Protein accessionYP_001262075 
Protein GI148554493 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGCC TTCGCGAAGA GAAGGGCTGG AGCCAGGAAG CCTATGCCGA TGAGGCAGGC 
ATCCACCGCA CCTATATCAG CGACATCGAG CGCGGGGCGC GGAATCCGAC GGTGAAGGTC
GTTGAGAAAC TGGCTGCCCC CTTCGGCGTG CCCGCTGGTC AGCTCATCGA TTAA
 
Protein sequence
MRRLREEKGW SQEAYADEAG IHRTYISDIE RGARNPTVKV VEKLAAPFGV PAGQLID