| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1573 |
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| Symbol | |
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| ID | 5197741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1749698 |
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| End bp | 1752088 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640581121 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262074 |
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| Protein GI | 148554492 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTAA GATCTTTGTT CGCCGCGTCG ACTGCCGTCG GTGGTGCATG GCTTTGGCTC
ATGGCCAGTC CGGCGTTTGC GCAGGATAAT CGACCGGCAA CCGGCGATGC CGCCGGCGCC
GTAGCGGCGG AGGCCGATCC GTCCGATAAT GGCGGGCTGG GCGAGATCGT GGTCACGGCC
CAGCGCCGCT CAGAGAATCT ACAGCGGGCA GCGATTGCCA TCACTGCGGT TCCCGCCGAA
GCCCTGGTCC GGCTCGGCGT GTCCGACACC AACCAGATCA CGCGCGTGGC GCCGGCCCTG
CAAGTCAGCA CGCTGGCAGG TACCTCGACG CAACTCTATC TGCGCGGCGT TGGCAACTTC
ACCACCAACT CGCTCAGCGA TGCGGCGGTG TCGGTCAATC TGGACGGTGT TGCGATCGCC
CGCAGCAGCG CCATCCAGGG CTTCTTCTAC GACCTGGAGC GCATCGAGGT CCTGAAGGGG
CCGCAGGGCA CGCTCTACGG CCGCAACGCG ACCGGCGGTG CCGTCAACAT CATCACCGCC
AAGCCGGTGT TCGGCGAAAC GAGTGGCTAT GTGAATGCGG AATACGGCAA TTTCGATGCC
AAGAAACTCA CCGCCGCGCT CAACATCGGG GTCGACGAAC GCTCCGCGAT TCGCGTGTCG
GGATATTTCT CCAACCATGA CGGCTATTAT TCCGACGGCA CCAGCGACGA TCGTACCCGC
GCCGGGCGGA TCCAGTTCGC ATCGCAACTG ACCGACACAT TCAAGCTGAC GCTTGGCGCA
GACGTGGCGC ATGTCGGCGG TCGCGGTGCG GGCGCAACGG TCAACGGACT TGATCGGGAC
AAGCGCATCG GGCTCGCGGA CGCACCCGCT CAGGCCATAT TCGGCAGCAG TTTTTCGTTC
CTCGCGGGCA ATTTCCTTCA TCCGCTTCCG AACGATGCCT ATAGCGACAA CACCTATTTC
GGCTTTTATG CACAAGCCGA CATCAATACG CCGATCGGGA CGCTCACGAT CCTGCCGGCC
TATCGTCGGG CGGATATCGA TACCCTTGGT TATGGCGGAG GCTTCGCCTT CCTCGAAGGT
CTGAAGGCCG ACCAGACGAC GATCGAGGCG CGCCTGGCTT CGGATGGCGA CGCTCCGCTG
AGCTACATCG TCGGGCTATA TTATCTCGGC GAACATGCCG TCGAGCGCGC CAACTTCAAC
CAGCAATATT TCGCGGCCTA TGGCCTGTTC GACAGCAACA CGGACAGCTA CGCGGGATTT
GGCCGCCTGA CGTACAAGGT CACCGATAGC TTTCGCCTGA CCGGCGGGCT TCGCTATACG
ATCGACGACA AGCGGGCGCT GATCGACTCC TACAACCCGA TCGTGGTCTG CCCGGCCGTT
TTCGCTGGTG GCAACTGCAT CGGCAATACC CCGGCCCTGC CCGTGCAATC GCTGGTGCCT
TCATCGCTGA TCCTTCCCAA CGGCGATCCG ATACCGGTCC TGCCCTGGGG AACCGCGGGC
GCGATCATCC AGGACTCGCG TCCGGTGCTG ACGCCCAGCA AGAAGTTCAA GAAGCTCACC
TATCGCGTCG GGGTCGAATA TGATCTCGGT CCGCAATCGC TGCTGTACGC CAGCTATGAG
ACCGGCTTCA AATCTGGCGG CTTCTTCAGC TCTATCGACA ATCCGGTCTA TCAGCCGGAA
ACGATCAACG CGATCACCCT GGGATCGAAG AATCGCTTCC TGAACAATCG CCTGCAGGTC
AACATCGAAG GGTTCTGGTG GAATTATAAG AACCAGCAGG TTTCCCACTT CCGGCTCAAC
AGCCAGGGCG GGACGGAGTT CGTGACCGAG AATGTCGGCA AGTCGCGAAT CCGGGGTTTC
GAGGTGGAAG TCCGCGGCCG TCTGGGCGGG GGCACGACCG TCAGCGGAAC CGTGCAGTAT
CTCGATGCCA AATATCGCAA CTTCACGTAC GCGAATCCGT CGAATCTCGG CCCGCCCGTC
ACCGGATGCG CGTTCGCGCC GAATGGCGAC GGCAGCCAGT TCATCGTGAA CTGCAGCGGG
CGCCGTGCGA TCAACGCGCC GGAATTGTCG CTGACGGGCG GCATCGAGCA GATTTTCGAT
CTGGGTGACT CCAGCCGGAT CGTGATCAAT CTGGACGGGC GCTATCAGTC GAAGATCTTC
ACCGGCTTCG AGCAACTGCC GCAGCAGTCG CAAAAGGGCT ATTTCATGGC GGACGCCCAG
GTGAGCCTCG AGCTGAGGAA TCCCGGCATC ACCATCTCCG GCTTCGTGAA TAACCTTACC
GACAGGAACG TGGTGAGCTT CTCGACGCCT CACCCGCGCG CCAGCCAGCT CGTCGTCGAA
AGCCTGCGGC CGCCGCGGAC CTATGGCGTT CGCGTCGGTT ACAAGTTCTA A
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| Protein sequence | MKLRSLFAAS TAVGGAWLWL MASPAFAQDN RPATGDAAGA VAAEADPSDN GGLGEIVVTA
QRRSENLQRA AIAITAVPAE ALVRLGVSDT NQITRVAPAL QVSTLAGTST QLYLRGVGNF
TTNSLSDAAV SVNLDGVAIA RSSAIQGFFY DLERIEVLKG PQGTLYGRNA TGGAVNIITA
KPVFGETSGY VNAEYGNFDA KKLTAALNIG VDERSAIRVS GYFSNHDGYY SDGTSDDRTR
AGRIQFASQL TDTFKLTLGA DVAHVGGRGA GATVNGLDRD KRIGLADAPA QAIFGSSFSF
LAGNFLHPLP NDAYSDNTYF GFYAQADINT PIGTLTILPA YRRADIDTLG YGGGFAFLEG
LKADQTTIEA RLASDGDAPL SYIVGLYYLG EHAVERANFN QQYFAAYGLF DSNTDSYAGF
GRLTYKVTDS FRLTGGLRYT IDDKRALIDS YNPIVVCPAV FAGGNCIGNT PALPVQSLVP
SSLILPNGDP IPVLPWGTAG AIIQDSRPVL TPSKKFKKLT YRVGVEYDLG PQSLLYASYE
TGFKSGGFFS SIDNPVYQPE TINAITLGSK NRFLNNRLQV NIEGFWWNYK NQQVSHFRLN
SQGGTEFVTE NVGKSRIRGF EVEVRGRLGG GTTVSGTVQY LDAKYRNFTY ANPSNLGPPV
TGCAFAPNGD GSQFIVNCSG RRAINAPELS LTGGIEQIFD LGDSSRIVIN LDGRYQSKIF
TGFEQLPQQS QKGYFMADAQ VSLELRNPGI TISGFVNNLT DRNVVSFSTP HPRASQLVVE
SLRPPRTYGV RVGYKF
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