Gene Swit_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1561 
Symbol 
ID5198537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1735790 
End bp1736923 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content66% 
IMG OID640581109 
Producthypothetical protein 
Protein accessionYP_001262062 
Protein GI148554480 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGGGC GGGCCAAGCA GGTTGTTATA GTCGGTGGTG GCATCAGCGG GATGACGCTG 
GCAGTGGCGC TGCGCCGTCA GGGCGTGGCG GCGCATGTCG TCGAAAAGGC GCGGCCTGAG
GATCAGCTGG GGACAGGCAT CAACCTCCAG AACAACGCAC TGAGGGCGCT GAAGCAGGTC
GGTCTCCTCG ACGATTGTCT CGCGGCGGGC TTTCCATGGA ACAGCGTCGT GACGCGGGAC
CATAAGGGCC ATGTGCTCGA CGAACGCACG CTGCCATGGA CGCTCGAGCC GGGGATTCCC
GGCGCGCTCG GCATCATGCG GACAACCTTC GCGAAGATCC TCGCGGATCA TGCGGAGCGC
GAGGGCGTCG ACATCAGCTA CGGGACGACG GTCGACAAGG TCGACCAGCA TGCCGACGGC
GTCGATGTCC AGCTCTCGAG CGGGGAAAGC CTGCGCGCCG ACGTGCTGGT CGCCGCGGAC
GGCGTTTATT CGCCTCTCCG GAACCTGGTC TTCGGGACCG AGCACCGGCC CTTCTATGCG
GGCCAGGGCG TCTGGCGGTA CACGGTGCCG CGGCCCGAGA CGCTGGATGG CTTCACGATG
TTTCGGGGGC CCACCGGAGG GGCTGTCGGC TGCCTACCTC TCGCGCCCGA CACCGCTTAT
TTCTTCCTGC TGGAAAGCTC CGTCTCGCCG ATCCGTTTCG AGGAAGCGGA GCTTGCCAGC
GCACTCGCCG AGCGTTTGGC GCCATTCGAA GCGCCCGAAC TGCGTGACGC CGTCGCCAAG
ATCGACGAAG GTCGCCACAT CAGCTTTCGT CGCTTCGACA TCCTGCTGAT GCCGCAGCCC
TGGCATCGCG GACGCGTCGT CCTGCTGGGG GATGCCGCCC ATTCGGTGAC GCCGCAGCTC
ACGTCCGGCG GCGGCATGGC GATCGAAGGC GCAGCCGTCC TGGCCGAAGA GCTTGGCCGG
CACGAGGCAG TCGCGGCCCT GAGTGCCTAT GGCAAACGCC GGGCCGAACG GGTGCGCACC
ATCTACGACA ATTCGCTTCG GATCTGCGAG CTGGAAAAGG ACCCGACGAG TGATGGCAGC
GAGAGCGTCA AGCTCTTCGT CGAAAGCTTC AAGCTGCTCG ACGGCCCTTA CTGA
 
Protein sequence
MEGRAKQVVI VGGGISGMTL AVALRRQGVA AHVVEKARPE DQLGTGINLQ NNALRALKQV 
GLLDDCLAAG FPWNSVVTRD HKGHVLDERT LPWTLEPGIP GALGIMRTTF AKILADHAER
EGVDISYGTT VDKVDQHADG VDVQLSSGES LRADVLVAAD GVYSPLRNLV FGTEHRPFYA
GQGVWRYTVP RPETLDGFTM FRGPTGGAVG CLPLAPDTAY FFLLESSVSP IRFEEAELAS
ALAERLAPFE APELRDAVAK IDEGRHISFR RFDILLMPQP WHRGRVVLLG DAAHSVTPQL
TSGGGMAIEG AAVLAEELGR HEAVAALSAY GKRRAERVRT IYDNSLRICE LEKDPTSDGS
ESVKLFVESF KLLDGPY