Gene Swit_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1497 
Symbol 
ID5200202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1655121 
End bp1655861 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content70% 
IMG OID640581044 
Productdienelactone hydrolase 
Protein accessionYP_001261998 
Protein GI148554416 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAGAG TCATGCACAC CGAAATTCTG ACCTACGAGG CCGACGGCCT GCGTATGGAA 
AGCCACCTCT TCGTCGATCC CGCGCAGAGC GGCCGGCGGC CCGGCGTGCT GGTCTTCCCC
GAAGCCTTCG GCCTGGGCGA TCATGCCAAG GAGCGGGCGC GCCGGCTGGC CGGGCTCGGC
TATGCCGCGC TGGCCTGCGA CCTCTATGGC GAAGGTCGGT TCATGGCCGA TCGCGAGCAG
ATGATGGCGC TGTTCGGCCC GCTGCGCGAG GCGCCCGAGC GGATCCGCGC GCGCGCCGGC
GGCGGCTTCG AGGCGCTGCT CGGCCGGGAC GAGGTCGATC CGGCGCGGAT CGCCTCGATC
GGCTATTGCT TCGGCGGCAC CATGTCGCTC GAACTGGCGC GCGGCGGCGC GCCGATCGCG
GGCGTGGTCG GCTTCCATAG CGGCCTCGCG ACCGGACGGC CGCAGGACGC GAAGGACATA
AGGGCGCGGA TATTGGTGCT GATCGGCGCC GACGATCCGG GGATTCCCCC CGAGCAGCGC
GCCGCCTTCG AGGCGGAGAT GCGCGCCGGC AAGGTCGACT GGCAGATGAA GCTCTATGGC
GGCGTGGTCC ACAGCTTCAC CAACAAGGAC GCCGACGCGA TGGGAATGCC CGATTTCGCC
CGCTACGACG CGGCCGCCGA CCGGCGCTCC TGGGACGAGA TGATCGCCTT CTTCGGCGAG
ATATTCGGCA AGGCCGCCTG A
 
Protein sequence
MGRVMHTEIL TYEADGLRME SHLFVDPAQS GRRPGVLVFP EAFGLGDHAK ERARRLAGLG 
YAALACDLYG EGRFMADREQ MMALFGPLRE APERIRARAG GGFEALLGRD EVDPARIASI
GYCFGGTMSL ELARGGAPIA GVVGFHSGLA TGRPQDAKDI RARILVLIGA DDPGIPPEQR
AAFEAEMRAG KVDWQMKLYG GVVHSFTNKD ADAMGMPDFA RYDAAADRRS WDEMIAFFGE
IFGKAA