Gene Swit_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1493 
Symbol 
ID5200198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1650513 
End bp1650911 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content69% 
IMG OID640581040 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001261994 
Protein GI148554412 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCTA GGTTCGAACG CTCCCTGCCC GCCGGCGCGG CCGGTCTTCC CGCATTGCTC 
GCGGAGATAG AGACCTGGCT GGACGCCGCC GGGGTCCCGC CCGTCGAGGC GGCGCGGATG
ATGATCGCGT TCGACGAGGT GCTGAGCAAC ATCGCCAAGC ATGGCGGCGG GATGCTGTCG
GTCTCGCTGG CGATCGCCGA CCGGCGCCTC GCCGCCACCA TCGTCGACGA CGGCCCGCCC
TTCGACCCGC TCGCCCGCGA GGCACCCGAC ACCGATCTCG ACATCGACGA CCGCGCGATC
GGCGGGCTCG GCATCCACCT GGTCCGGCAA TTGATGGACG ACGTCGCCTA TGCCCGCGAC
GAGGATCGGA ACCGGCTGAT CTTTAGCAAG ACTTTCTGA
 
Protein sequence
MGARFERSLP AGAAGLPALL AEIETWLDAA GVPPVEAARM MIAFDEVLSN IAKHGGGMLS 
VSLAIADRRL AATIVDDGPP FDPLAREAPD TDLDIDDRAI GGLGIHLVRQ LMDDVAYARD
EDRNRLIFSK TF