| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1377 |
|---|
| Symbol | |
|---|
| ID | 5198824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1519979 |
|---|
| End bp | 1520602 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640580923 |
|---|
| Product | 50S ribosomal protein L25/general stress protein Ctc |
|---|
| Protein accession | YP_001261879 |
|---|
| Protein GI | 148554297 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
|---|
| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0448782 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG TGCTCGACCT GTCGGCCGAG GCACGCGAGC GGGCTGGCAA GGGAGCCTCC
CGCGCGATCC GCCGCGAAGG CCGCGTCCCC GCCGTGATCT ACGGCGAAAA GCAGGAACCC
GCCTCGATTC ACGTCGAGGA GAAGGTCCTC ATGAAGCTGC TGCACACCGG CCACTTCTTC
AACAGCGTGG TCATGCTCGA TGTCGGCGGC AAGAAGGTCC GGACCCTGCC GAAGGACGTC
CAGTTCCATC CGGTCACCGA CCGTCCGCTG CATGTCGACT TCCTGCGCAT CGGCGAACAC
ACCAAGGTCA ACGTCAACGT TCCGGTCCAC TTCAAGGACG AGGAACTGTC GCCGGGCCTG
AAGCGTGGCG GCGTTCTCAA CGTCGTCATC CATGACCTGG GCCTGTCGGT CGACGCGGCC
GAGATCCCGG AGGAGATCGT GATCTCGCTG AAGGGTCTCG AGGTGGGCGA GAGCATCCAC
CTGTCGCAGG TCGCCCTGCC CAAGGGCGCG TCCGCGCAGG ACCATGAAGA CATCACCATC
GCGACGATCG TCGCCCCGTC GGCGCTGAAG AGCGCCGAGG GCGAGGAAGC CGCCGAAGCC
GGTGAAGAGG CCGCCGAGGG CTGA
|
|---|
| Protein sequence | MSEVLDLSAE ARERAGKGAS RAIRREGRVP AVIYGEKQEP ASIHVEEKVL MKLLHTGHFF
NSVVMLDVGG KKVRTLPKDV QFHPVTDRPL HVDFLRIGEH TKVNVNVPVH FKDEELSPGL
KRGGVLNVVI HDLGLSVDAA EIPEEIVISL KGLEVGESIH LSQVALPKGA SAQDHEDITI
ATIVAPSALK SAEGEEAAEA GEEAAEG
|
|---|
| |