Gene Swit_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1357 
Symbol 
ID5200806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1505224 
End bp1505694 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID640580904 
Product30S ribosomal protein S7 
Protein accessionYP_001261860 
Protein GI148554278 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.216177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.156849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTC GTCGCCGTCC CGAAAAGCGC GAAATTCTCC CCGATCCGAA GTTCGGGGAT 
GTCGTGCTCA GCAAGTTCAT GAACAGCGTC ATGCTCGACG GCAAGAAGTC CGTCGCCGAA
GGCATCGTCT ATGGCGCTCT CGAAACCATC GAAACCCGCG CCAAGCGCGA GCCGCTGGGC
GTCTTCCATG AAGCGCTCAA CAATGTGAAG CCGGGCATCG AGGTCCGCAG CCGCCGCGTC
GGCGGTGCGA CCTACCAGGT CCCGGTCGAG GTCCGTCCGG ACCGTTCGCA GGCGCTCGCC
ATCCGCTGGC TGATCAGCGC CGCGCGGGCG CGGTCGGAGC ACACCATGGC CGGTCGTCTG
TCGGGCGAGC TGCTGGATGC CGCGAACAAC CGTGGCAATG CGGTCAAGAA GCGTGAGGAC
ACGCACCGCA TGGCCGAGGC GAACCGCGCC TTCTCGCACT ATCGCTGGTA A
 
Protein sequence
MARRRRPEKR EILPDPKFGD VVLSKFMNSV MLDGKKSVAE GIVYGALETI ETRAKREPLG 
VFHEALNNVK PGIEVRSRRV GGATYQVPVE VRPDRSQALA IRWLISAARA RSEHTMAGRL
SGELLDAANN RGNAVKKRED THRMAEANRA FSHYRW