Gene Swit_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1349 
SymbolrpsS 
ID5200641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1498267 
End bp1498539 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content61% 
IMG OID640580896 
Product30S ribosomal protein S19 
Protein accessionYP_001261852 
Protein GI148554270 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0185] Ribosomal protein S19 
TIGRFAM ID[TIGR01050] ribosomal protein S19, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.137865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTT CCATCTGGAA AGGTCCGTTC GTCGATCTCC ACCTTCTCCG GAAGGCGGAA 
GGCGCTCAGG ACAGTGGCGC GCGCGCTCCG ATCAAGACCT GGTCGCGTCG TTCGACCATC
TTGCCGCAGT TCGTCGGTCT GACGTTCAAC GTCTACAATG GCCGCAAGTT CGTGCCGGTT
TCGGTCTCCG AGGAAATGGT CGGTCACAAG CTGGGTGAAT TCGCGCCGAC GCGCTACTTC
CCCGGCCATG CCGACAAGAA GGGTAAGCGC TGA
 
Protein sequence
MARSIWKGPF VDLHLLRKAE GAQDSGARAP IKTWSRRSTI LPQFVGLTFN VYNGRKFVPV 
SVSEEMVGHK LGEFAPTRYF PGHADKKGKR