| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1333 |
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| Symbol | secY |
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| ID | 5200756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1490217 |
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| End bp | 1491584 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640580880 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001261836 |
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| Protein GI | 148554254 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.158258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCG CAGCCGAACA GATGGCCGCC AACATCAATC TGAGCCAGTT CGCCAAGGCG
ACCGAGCTCA AGAAGCGCCT GTGGTTCACC CTGGGCGCGC TCATCATTTT CCGCCTGCTG
AGCCATGTGC CGCTTCCCGG CCTCGATCCG CGGTCGCTCC AGTCGCTGTT CGACACGACC
AAGGGCGGCG TACTCGACTT CTTCAACGCC TTCTCGGGCG GCTCGCTGAC CCGCATGTCG
CTGATCGCGC TCGGCGTGAT GCCGTACATC ACCGCCTCGA TCGTGGTGCA GCTCGCGACC
TCGCTGTCGC CGACGCTCGC CGCGATCAAG AAGGAGGGCG AGAGCGGGCG CAAGAAGCTC
AACCAGTACA CCCGCTACGG CACGGTGCTG CTGACCGGCA TCCAGGGCTA TTTCATCGCG
GTCGGCCTCG AGAGCTGGGG CGCCAGCGCC GGGATGGAGG CGGTCGTGAT CGACCCGTAT
CTGTTCCGCG CGACGACGGT GATCTCGCTG ATCGGCGGCA CGATGTTCCT GATGTGGCTG
GGCGAGCAGA TCACCAGCCG CGGCATCGGC AACGGCATCT CGCTGATCAT CATGGCGGGC
ATCGTCTCGC AGCTGCCGAC CGCGCTGGCC AACCTGTTCG AAGGCGGCCG CACCGGATCG
CTGTCGGCGA TGTTCATCGT CCTGGCGGTG ATCGGGGTGA TCGCGCTGGT CGCCGGCATC
GTCTTCATGG AGCGGGCGCA GCGCCAGGTG CTGATCCAGT ATCCCAAGCG CCAGACCGCG
CGCGGCATGA TGCAGGCCGA CAAGAGCCAC CTGCCGCTCA AGATCAACAC CGCCAACGTG
ATCCCGCCGA TCTTCGCCTC GTCGCTGCTG CTGATGCCGC TGACGATCAG CCAGTTCGCC
GGGCAGCGCA CCCAGGGCGA GAGCCTGTGG GGCGACTTCA TCATCGGGAT GAACCAGTAT
CTGCACCACG GCACGCCGCT CTACATGGCG CTCTATGCCG CGGGCATCAT CTTCTTCTGC
TTCTTCTACA CCGCCGTCGT CTTCAATCCG GAGGAGACCG CGGACAATCT GAAGCGCTAT
GGCGGCTTCA TCCCCGGCAT CCGCCCGGGC AAGAACACCG CCGACTATCT GGACTATGTG
CTGACCCGCA TCACCGTGAT CGGGGCGGCC TATCTGACCT TCATCTGCCT GGTGCCCGAA
TATGTCACAG CGCAATATGG CCTGGGCATC GCGCTGGGCG GTACCAGCCT GCTGATCGTC
GTCAACGTGA CGATCGATAC GGTGACGCAG ATCCAGAGCC ATCTGCTCGC GCACCAGTAT
GGCGACCTGA TCAAGAAGGC CAAGCTCAAG GGGGGAATGC GGAGGTGA
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| Protein sequence | MASAAEQMAA NINLSQFAKA TELKKRLWFT LGALIIFRLL SHVPLPGLDP RSLQSLFDTT
KGGVLDFFNA FSGGSLTRMS LIALGVMPYI TASIVVQLAT SLSPTLAAIK KEGESGRKKL
NQYTRYGTVL LTGIQGYFIA VGLESWGASA GMEAVVIDPY LFRATTVISL IGGTMFLMWL
GEQITSRGIG NGISLIIMAG IVSQLPTALA NLFEGGRTGS LSAMFIVLAV IGVIALVAGI
VFMERAQRQV LIQYPKRQTA RGMMQADKSH LPLKINTANV IPPIFASSLL LMPLTISQFA
GQRTQGESLW GDFIIGMNQY LHHGTPLYMA LYAAGIIFFC FFYTAVVFNP EETADNLKRY
GGFIPGIRPG KNTADYLDYV LTRITVIGAA YLTFICLVPE YVTAQYGLGI ALGGTSLLIV
VNVTIDTVTQ IQSHLLAHQY GDLIKKAKLK GGMRR
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