Gene Swit_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1317 
Symbol 
ID5200629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1475232 
End bp1475678 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content67% 
IMG OID640580864 
Producthypothetical protein 
Protein accessionYP_001261820 
Protein GI148554238 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.559236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.844018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCG ATCGTCGCCG AAAGGAGATG AAGGTGATGG CGGCGTCGCA CTGGTTGGTG 
AAGTCGGAAC CGAACAGCTA TTCCTATGCC GATCTCGAAC GCGATGGCCG CACCGTCTGG
GATGGGGTGC GCAACAATGC CGCCGCGCTG CATCTGAAGG CGATGAAGGA GGGGGACGAG
GTCCTCTTCT ATCACAGCCA GGAGGGGCTG GCCGTGGTCG GCGTCGCCAG GGTGGTGCGC
ACCGCCTTTC CCGACGCGAC CGATCCGGCG GGGCGTTTCG TCGCGGTCGA ACTGGCGCCG
ATCCGCGCGC TGGCAAAGCC CGTCACCCTC GCCGCGATGA AGGCGGAACC CGCGCTGGCC
GGCATGGCGA TGCTGCGGCA GAGCCGGCTG TCGGTGTCTC CCGTCTCCGA CGCCGAATGG
GACGTGATCC TGAAGATGGC GGCCTGA
 
Protein sequence
MAADRRRKEM KVMAASHWLV KSEPNSYSYA DLERDGRTVW DGVRNNAAAL HLKAMKEGDE 
VLFYHSQEGL AVVGVARVVR TAFPDATDPA GRFVAVELAP IRALAKPVTL AAMKAEPALA
GMAMLRQSRL SVSPVSDAEW DVILKMAA