Gene Swit_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1306 
Symbol 
ID5200431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1462515 
End bp1463081 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content72% 
IMG OID640580853 
Producthypothetical protein 
Protein accessionYP_001261809 
Protein GI148554227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.47922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTGC GCGACAGCGG CGCCTCGATC GTCGAGGCGA TCGCCGGCAC GCTGCGGTCG 
ATGCCGCAGG CCTATCCCTT CCTGCTGACC ACCGCCGACA ACGTCCTGCT CGACGACGCG
ATGATCGACC GGTTCAAGGT CGGCGCCGAG GGAGCCGACA TCGCCGTGGC GCTGGTCGAG
AGGAAGGTGC TGGAGGCCGC CTATCCCGGC AACCGCCGCA CCTGGCTGCC GTTTCGCGGC
GGCGCCTATT CGGGCGCCAA CCTGTTCTGG CTCGGCAGCC CGGAGGCGCT CGAGGTGCTC
GCCATCTGGC GGCGCGTCGA GCAGCAGCGC AAGAAGGCGC GCGCGGTGCT CGGCGCCTTC
GGCGTGGGCC TGTCGCTGAT GATCGCGCTC CGGATGCTGA CCCTCGGCGG CGCGGTCGCG
CGGGTGGGGC GGCGGCTGGG CCTGACCGCG AAGGCCGTCC TGCTGCCCTA TGCCGAGGCT
TGCATCGACG TCGACAAGCC CTCCGACCAT GCAATGGTCG AGGCTATCCT GCGGGCGCGG
GCGTCGCGGC CCGATCCGGA GCTATAG
 
Protein sequence
MTVRDSGASI VEAIAGTLRS MPQAYPFLLT TADNVLLDDA MIDRFKVGAE GADIAVALVE 
RKVLEAAYPG NRRTWLPFRG GAYSGANLFW LGSPEALEVL AIWRRVEQQR KKARAVLGAF
GVGLSLMIAL RMLTLGGAVA RVGRRLGLTA KAVLLPYAEA CIDVDKPSDH AMVEAILRAR
ASRPDPEL