Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1296 |
Symbol | |
ID | 5200790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1447607 |
End bp | 1448998 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580843 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001261799 |
Protein GI | 148554217 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACT ATGATTTCGA CGTGATCGTC ATCGGCGCGG GTCCCGGCGG CTATGTCGCC GCGATCCGCG CGGCGCAACT CGGCCTCAGG ACCGCCTGCG TGGAGAGCCG CGAGACGCTC GGCGGCACCT GCCTCAACGT CGGTTGCATC CCGTCCAAGG CGATGCTCCA CGCGTCCGAG CTCTATGACG AGGCCGCCAG CGGCAAGCTC GCCAAGCTCG GCATCAAGAC CCAGGTCGAG CTCGATCTCG ACACGATGCA CGGCCAGCGC CGCGACGCGG TCAAGGGCCT GACCGGCGGC ATCGAGTTCC TGTTCAAGAA GAACAAGGTC GAATGGCTGA AGGGCCATGC GGCGTTCACC GGCAAGGACA GGATCGACGT CGCGGGCAAG AGCTACCGCG CCCGGAACAT CGTCGTCGCC ACCGGCTCCA GCGTCACCCC GCTGCCGGGC GTCGAGATCG ACGAGAAGGT GGTCGTCTCC TCGACCGGCG CGCTCGAGCT GGCGAAGGTC CCCGGCCATC TGGTCGTGAT CGGCGGCGGC GTGATCGGCC TGGAGCTGGG CTCGGTCTGG AAGCGCCTCG GCGCCAAGGT CACCGTCGTC GAGTTCCTCG ACCAGCTGCT GCCCGGCATG GACGGCGAGG TCCGCAAGGA AGCCGCCAAG ATCTTCAAGA AGCAGGGCAT CGAGCTCAAG CTGTCGACCA AGGTCACCGG CGTCGCCGTC AAGGGCGGCA AGGCGACCGT CACCGTCGAG CCCGCCGCCG GCGGCGCCGC GGAGACGCTG GAGGCCGACG CCGTGCTGGT GTCGATCGGC CGCCGCCCGA ACACCGAGGG CCTAGCGCTC GAAAGGGCTG GCCTGACCGT CAACAAGCGC GGCCAGATCG AGGTCGACCA CGACCTCGCG ACCGCCGTCC CCGGCATCTG GGCGATCGGC GACGTCGTCC CCGGCCCGAT GCTGGCGCAC AAGGCCGAGG ACGAGGGCAT CGCCGTCGCC GAGAACATCG CCGGGCTGAC CGGCATCGTG AACCACGACG TCATCCCCGG CGTCGTCTAC ACCATGCCCG AGATCGCCGG CGTCGGCCTG ACCGAGGAGG AGGCGAGGGA GCGCGGCGAG GTGAAGATCG GCAAGTTCCC GATGCTCGCC AATTCGCGCG CCAAGACCAA CCATGAGCCC GATGGCTTCG TGAAGGTGAT CGCCGACGCA AAGACCGATC GGGTGCTGGG CGTCCACATC ATCGCCTCGG TCGCCGGCAC GATGATCGCC CAGGCCGCCC AGGCGATGGA GTTCGGCGCG ACCAGCGAGG ACATCGCCTA TACCTGCCAC GCGCATCCGA CCCATTCGGA AGCGATCAAG GAGGCGGCGA TGGCCGTCAC CGGCAAGCCG ATCCACATGT GA
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Protein sequence | MSDYDFDVIV IGAGPGGYVA AIRAAQLGLR TACVESRETL GGTCLNVGCI PSKAMLHASE LYDEAASGKL AKLGIKTQVE LDLDTMHGQR RDAVKGLTGG IEFLFKKNKV EWLKGHAAFT GKDRIDVAGK SYRARNIVVA TGSSVTPLPG VEIDEKVVVS STGALELAKV PGHLVVIGGG VIGLELGSVW KRLGAKVTVV EFLDQLLPGM DGEVRKEAAK IFKKQGIELK LSTKVTGVAV KGGKATVTVE PAAGGAAETL EADAVLVSIG RRPNTEGLAL ERAGLTVNKR GQIEVDHDLA TAVPGIWAIG DVVPGPMLAH KAEDEGIAVA ENIAGLTGIV NHDVIPGVVY TMPEIAGVGL TEEEARERGE VKIGKFPMLA NSRAKTNHEP DGFVKVIADA KTDRVLGVHI IASVAGTMIA QAAQAMEFGA TSEDIAYTCH AHPTHSEAIK EAAMAVTGKP IHM
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