| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1281 |
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| Symbol | |
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| ID | 5199787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1433575 |
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| End bp | 1434303 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580828 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_001261784 |
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| Protein GI | 148554202 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.587484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTGGCTG AGAAGATCGA TCCGGCGCTC ACCTATGGCC GCAAGCCGCA GAAGACGCGG
CCCGAGGACC TGGTCCGCGC GCACATGCAA CTCGTCCGCA AGATCGCCTG GCACGTCCAT
GGCCGGGTCT CGACCGCGAT CGACGTCGAG GACCTGATCC AGATCGGCAT GATCGCGCTG
GTCGAGGCCG CGAACGGCTA TGAGGATCGT GGCCACGCCT TCTCGACCTA TGCGTCGATG
CGGGTGCGCG GCGCGATGAT CGATCATCTC CGCCGCCAGG CCGCGCTGAC CCGATCGGCG
ATGGCCAAGC GGCGCGCGCT GCTCACCGCC AAGGCCGATT TCGAGAAGAA GCACGGCCGC
AGCCCCAGCG AGTCCGAACT CGCCCAGGCG CTCGGCCTCG ACGGCGCCGC CTTCCACGCG
CTGCTCGACG AGACCGCCGC GACCTATCAC GAGTCGATCG ACGAGGTATA TTCGGACCAG
TCGATGTGGT TCGCCGACGT CGAGGAACGG GTCGACCAGA CGATCGAGCG CGAGGAACTG
GCGGGCGCGC TCGCCGAGCA TATCTCCGAG CTGCCCGAGC GCGAGGCGAT GGTCCTCCAG
CTCTATTTCG TCGAGGAGAT GAACCTCGAG GAGATCGGCC AGACGCTGGG CATCGGCGCC
GCGCGCGTCT GCCAGATCAA GAAGGCCGCG CTCGACAAGC TGCGCGTGTC TCTACGGGAG
TGGGGTTGA
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| Protein sequence | MLAEKIDPAL TYGRKPQKTR PEDLVRAHMQ LVRKIAWHVH GRVSTAIDVE DLIQIGMIAL
VEAANGYEDR GHAFSTYASM RVRGAMIDHL RRQAALTRSA MAKRRALLTA KADFEKKHGR
SPSESELAQA LGLDGAAFHA LLDETAATYH ESIDEVYSDQ SMWFADVEER VDQTIEREEL
AGALAEHISE LPEREAMVLQ LYFVEEMNLE EIGQTLGIGA ARVCQIKKAA LDKLRVSLRE
WG
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