Gene Swit_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1277 
Symbol 
ID5198293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1428112 
End bp1429044 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content71% 
IMG OID640580824 
Producthypothetical protein 
Protein accessionYP_001261780 
Protein GI148554198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.507228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG ACCGGCGGCG CACGCCGCTC TATTCCTATG CGACGCTGGC GGCGGTGATG 
CTGTTCTGGT CGGGCAACTT CATCGTCGGC CGGGCGGTGC AGGGGGCGAT CCCGCCCTTC
ACCCTGGCGC TGGTCCGCTG GAGCGGGGCG GCGCTGGTGC TGGCGCCCTT CGCCTGGCGG
CACCTGCGCG TCGACCGCGC GCTGCTCGCG GCGCAGTGGA GGATCGTGCT GCTGCTCGGC
CTGGTCGGCA TCGCGGCCTT CAACGGCTTC GTCTATGCCG GACTGCAATA TACCACCGCC
ACCAACGGCC TGCTGCTCCA GGCGGCGATC CCGGCGCTGG TGCTGCTGTT CGACCGGATG
CTGTTCGGCC AGCGCGCGAC ATGGGCGCAG ATGGCGGCGG TGCTGCTGTC GATCGCCGGG
GTGATCCTGA TCGTGCTGCG CGGCGATCCC TTCGCGATCC TGTCGATCGG GCTCAACATC
GGCGATCTGC TGGTGCTGGG CGGGGTGATC GGCTGGGCCG CCTATACCAG CCTGCTGCGG
CTGCGGCCGG CCAGCCATCC GCTCAGCTTC CTGTTCGTCG CCTTCCTGAT CGGTATCGCG
ACGATGGCGC CGCTGGCGAT GCTCGAATGG GCGCGCGGCG CGCGGGTCGT GATGGGCTGG
GGGACGGTCG GCGCCTTCGC CTATGTCGCG CTGCTGCCCT CGCTCGCCGC TTACATGCTC
TACAATGCGG CGGTGCATGA TCTGGGCGCC GGGCCGGCGG GGCAGACGAT CACGCTGATG
CCGCTGTTCG GCGCGCTATT GGCGGCCGGG CTGCTGGGGG AGACGCTGCA CGCCTATCAC
CTGACCGGTA TGGTGCTGAT CCTGGGCGGC ATCCTGATCG GCGCCTGGAT GCGCCCCGGG
CCGGCGCGCG GTCAGCGGTC CGGGCGGCCG TAG
 
Protein sequence
MTTDRRRTPL YSYATLAAVM LFWSGNFIVG RAVQGAIPPF TLALVRWSGA ALVLAPFAWR 
HLRVDRALLA AQWRIVLLLG LVGIAAFNGF VYAGLQYTTA TNGLLLQAAI PALVLLFDRM
LFGQRATWAQ MAAVLLSIAG VILIVLRGDP FAILSIGLNI GDLLVLGGVI GWAAYTSLLR
LRPASHPLSF LFVAFLIGIA TMAPLAMLEW ARGARVVMGW GTVGAFAYVA LLPSLAAYML
YNAAVHDLGA GPAGQTITLM PLFGALLAAG LLGETLHAYH LTGMVLILGG ILIGAWMRPG
PARGQRSGRP