Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1269 |
Symbol | |
ID | 5196145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1423897 |
End bp | 1424577 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640580816 |
Product | flagellar hook capping protein |
Protein accession | YP_001261772 |
Protein GI | 148554190 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.271153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATAT CCACCGGTAG CAGCTATCTC GACAGCCTGA ACGGCGCGAA GAACAGCTCG ACCACCACGA CCAAGAAGAG CAACGAGTCG CTCAGCCAGA ACGACTTCCT GAAGCTGCTG ACCACGCAGA TGCAGACGCA GGACCCGTTC AACCCGGTCG ACAACACGCA GATGGTCGCC CAGATGGCGC AATTCTCGCA GACGACCGGC ATCGCCGAGA TGAACCAGTC GCTCAAGTCG ATGGTCCAGA GCCTCCAGCA GTCGCGCGTC GCCGACGCCG CCAACTGGAT CGGCAAGGCG GCGCTGCTGC CGTCCAAGGC CGCCAGCGCG CTGGCCGACG GTTCCTTCGC CGGCAACGTC ACCCTGCCGG ACGCCGCCTC GCGGGTCGAC ATCAGCCTGG TCGATGGCAG CGGCACCGTC GTCTACACCG GCAGCGCCAC CAACGTGCCG GCCGGCGACG TCCCCTTCTA CTGGGACGGC AAGGACCAGG ACGGCAATCC CGTCGCCGGT CCGCTGACCA TCGTCGCCTC CGCCAAGGAC AGCCAGGCGC AGGCGATGGC CGGCATCACC ACGTCGAGCT GGGCCACCGT CGCGAGCGTC AGCTCGCCGG CCAGCGGTTC CACCAAGATC GTCACCCCGC TGGGCAATTT CGACCCGGCG GACGCCCTTC AGCTTTCCTG A
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Protein sequence | MTISTGSSYL DSLNGAKNSS TTTTKKSNES LSQNDFLKLL TTQMQTQDPF NPVDNTQMVA QMAQFSQTTG IAEMNQSLKS MVQSLQQSRV ADAANWIGKA ALLPSKAASA LADGSFAGNV TLPDAASRVD ISLVDGSGTV VYTGSATNVP AGDVPFYWDG KDQDGNPVAG PLTIVASAKD SQAQAMAGIT TSSWATVASV SSPASGSTKI VTPLGNFDPA DALQLS
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