Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1194 |
Symbol | |
ID | 5196422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1356107 |
End bp | 1356667 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640580741 |
Product | deaminase-reductase domain-containing protein |
Protein accession | YP_001261698 |
Protein GI | 148554116 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGGA TTCTCGGCTA TATCGCAACC AGTCTCGACG GCTTCATAGC GACCGAGGCC GATGATCTCG GCTGGCTATT CAAATATGAC GGCCTCGATC TGGGCGAATA TGACTACGCC CGCTTCCTCC AGCGAATCCG GACCGTCGTC ATGGGCCGGG GCACCTATGA TTTCATAGCC GCCGAGGATG TGCCCTGGGC CTATGGCGAT CAGCGCGTCC TGGTCGTCAC GTCGCGGCCG ATCCCCGCGC CGAAAGGCCC TTTGGAAACG CGAAGCGACG TCGATGCGCT GATCGCCGAG TTGCGATCGC TCGATGATGG CGACGTCTGG ATGCTCGGCG GCGGCCAGTT GCAGATGGCG TTTCTCGAGC GGGGGGCGCT CGACGAGATC GAAATCTATG TGATCCCCGA GATGATCGGC GGCGGTCGGC CGCTATTCCC CGCAACCGGC TTCCAGTCCA GCCCCCGCCT GATCAGTGCC CTGCCTCTGG ATCGCGGCTG CGTGCGCCTC CACTATGCCT TCGATCGTGA AGCTGGCGCT TCGGATCGCA ACCCGTCCTA G
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Protein sequence | MARILGYIAT SLDGFIATEA DDLGWLFKYD GLDLGEYDYA RFLQRIRTVV MGRGTYDFIA AEDVPWAYGD QRVLVVTSRP IPAPKGPLET RSDVDALIAE LRSLDDGDVW MLGGGQLQMA FLERGALDEI EIYVIPEMIG GGRPLFPATG FQSSPRLISA LPLDRGCVRL HYAFDREAGA SDRNPS
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