Gene Swit_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1177 
Symbol 
ID5198027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1340210 
End bp1341088 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content68% 
IMG OID640580724 
ProductS-formylglutathione hydrolase 
Protein accessionYP_001261681 
Protein GI148554099 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGC CCCTTTGCCT TGAAGGAATG ACGATGAGCC TCGAAACCGT CTCCAGCAAC 
CTTTCCTTCG GCGGCGTCCA GGGCGTCTAC AAGCACGCCT CGTCGGCGAC CGGCACCGAC
ATGACCTTCT CGGTCTATGT TCCGCCGCAC GATGCCGGCG CGAAGCTGCC GGTGGTCTGG
TATCTGTCGG GGCTCACCTG CACCCATGCC AACGTCACCG AAAAGGGCGA GTATCGCCGC
GCCTGCGCCG AGCTGGGCCT GATCTTCGTC GCACCCGACA CTTCGCCGCG CGGCGAGGGC
GTCGCCGACG ATCCCGAGGG CGCCTATGAT TTCGGGCTGG GCGCGGGCTT CTACGTCGAT
GCCACCCAGC CGCCCTTCGC GCCGCACTAC CGGATGTGGA GCTACGTCAC CGAGGAGCTG
CCCGCGCTGA TCGCGGAGCA TTTCCCCGTC GACATGGGCG CCCAGGCGAT CACCGGCCAT
TCGATGGGCG GCCATGGCGC GCTGACCATC GGCCTGACCT TCCCCGATCG CTTCCGCTCG
ATCTCGGCCT TCGCGCCGAT CGTCGCGCCG GGGCAGGTGC CGTGGGGCCG CAAGGCGCTG
CCCGGCTATC TCGGCGACGA CCAGGCCGCG TGGCGCCGCC ACGACGCCGT CGCGCTGATC
GAGGACGGCG CGCGGGTCAA GGAATTGCTC GTCGATCAGG GCGAGGCGGA CGGCTTCCTT
GCCGAACAGC TCAAGCCCAG CCTGCTCGCC GCCGCCTGCG CCGATGCGGG GATCGACCTG
ACGCTCACCA TGCGGCCGGG CTACGACCAC AGCTATTATT TCATCTCGAC CTTCATGGAG
GACCACCTCC GCTGGCATGC CGCGCGGCTG CGGGGGTAG
 
Protein sequence
MPAPLCLEGM TMSLETVSSN LSFGGVQGVY KHASSATGTD MTFSVYVPPH DAGAKLPVVW 
YLSGLTCTHA NVTEKGEYRR ACAELGLIFV APDTSPRGEG VADDPEGAYD FGLGAGFYVD
ATQPPFAPHY RMWSYVTEEL PALIAEHFPV DMGAQAITGH SMGGHGALTI GLTFPDRFRS
ISAFAPIVAP GQVPWGRKAL PGYLGDDQAA WRRHDAVALI EDGARVKELL VDQGEADGFL
AEQLKPSLLA AACADAGIDL TLTMRPGYDH SYYFISTFME DHLRWHAARL RG