Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1164 |
Symbol | |
ID | 5198667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1322657 |
End bp | 1323463 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640580711 |
Product | hypothetical protein |
Protein accession | YP_001261668 |
Protein GI | 148554086 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.287563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCAT CCATCGCCTA TCTCGGCCTG CTCGACGACG AGGAGATCGA ACTCGACATC GCCGCGCTCG AACTGAGCGC GCTCGACCAT CCGGGCATCG ACCTCGGGCC CTATCATGAT CAGCTCGACC TGCTCGAAGC CGAACTGCGC GACGAGGGCG CCGACGCGGA GACCAGCGAG GAACAGGCCG GCGCGCTGGC CCGGCTGTTG GCGGGCCGCT ACGGCTTCGC GGGCGACCAT GCCAGCTATG ACGCGCCGCT CAACGCCGAC ATGATCCGCG TGCTCGACCG GCGGCGCGGC CTGCCGGTCA GCCTGTCGAT CCTCTACGTC GCGCTCGCCC GCCGGCTGGG CTGGATCGCC GAGGCGCTCA ACACGCCGTC GCACGTATTG GTGCGGATCG GGCCGCTCGA TTCGCCGATC CTGATCGATC CGTTCCACGA CGGTCTGCCA GTCGGCGACG AAACGCTCGA CAAGCTGCTG CGGCGATCGT TGGGCCCGGA CGCGCGGATC GAGCCCGAGC ATGTCGCGCC GCTGCCCAAC CGGCTGGTGC TGGTCCGCCT GCTGCTCAAC CAGGCGACCC GCGCCGAACA GGCCGGCGAC GCCGCCCGCG CGATCGCCAT CTACGAGCGC ATCGTCGAGG TCGCACCCTC CCACGCGCAG GGCTGGTGGG ACCTTGCCCG CCTCCAACTC TCCGACGGCC GGGGCGAGGA AGCGCGCGGC AGCCTGAGCG CGATGCTGGA GATCACGCGC GACGCCGACG CCCGCGCGAC GATATTGGAG GCCTTGGAGG CGTTGTCGGG ACGTTGA
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Protein sequence | MIASIAYLGL LDDEEIELDI AALELSALDH PGIDLGPYHD QLDLLEAELR DEGADAETSE EQAGALARLL AGRYGFAGDH ASYDAPLNAD MIRVLDRRRG LPVSLSILYV ALARRLGWIA EALNTPSHVL VRIGPLDSPI LIDPFHDGLP VGDETLDKLL RRSLGPDARI EPEHVAPLPN RLVLVRLLLN QATRAEQAGD AARAIAIYER IVEVAPSHAQ GWWDLARLQL SDGRGEEARG SLSAMLEITR DADARATILE ALEALSGR
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