Gene Swit_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1164 
Symbol 
ID5198667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1322657 
End bp1323463 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content70% 
IMG OID640580711 
Producthypothetical protein 
Protein accessionYP_001261668 
Protein GI148554086 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.287563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAT CCATCGCCTA TCTCGGCCTG CTCGACGACG AGGAGATCGA ACTCGACATC 
GCCGCGCTCG AACTGAGCGC GCTCGACCAT CCGGGCATCG ACCTCGGGCC CTATCATGAT
CAGCTCGACC TGCTCGAAGC CGAACTGCGC GACGAGGGCG CCGACGCGGA GACCAGCGAG
GAACAGGCCG GCGCGCTGGC CCGGCTGTTG GCGGGCCGCT ACGGCTTCGC GGGCGACCAT
GCCAGCTATG ACGCGCCGCT CAACGCCGAC ATGATCCGCG TGCTCGACCG GCGGCGCGGC
CTGCCGGTCA GCCTGTCGAT CCTCTACGTC GCGCTCGCCC GCCGGCTGGG CTGGATCGCC
GAGGCGCTCA ACACGCCGTC GCACGTATTG GTGCGGATCG GGCCGCTCGA TTCGCCGATC
CTGATCGATC CGTTCCACGA CGGTCTGCCA GTCGGCGACG AAACGCTCGA CAAGCTGCTG
CGGCGATCGT TGGGCCCGGA CGCGCGGATC GAGCCCGAGC ATGTCGCGCC GCTGCCCAAC
CGGCTGGTGC TGGTCCGCCT GCTGCTCAAC CAGGCGACCC GCGCCGAACA GGCCGGCGAC
GCCGCCCGCG CGATCGCCAT CTACGAGCGC ATCGTCGAGG TCGCACCCTC CCACGCGCAG
GGCTGGTGGG ACCTTGCCCG CCTCCAACTC TCCGACGGCC GGGGCGAGGA AGCGCGCGGC
AGCCTGAGCG CGATGCTGGA GATCACGCGC GACGCCGACG CCCGCGCGAC GATATTGGAG
GCCTTGGAGG CGTTGTCGGG ACGTTGA
 
Protein sequence
MIASIAYLGL LDDEEIELDI AALELSALDH PGIDLGPYHD QLDLLEAELR DEGADAETSE 
EQAGALARLL AGRYGFAGDH ASYDAPLNAD MIRVLDRRRG LPVSLSILYV ALARRLGWIA
EALNTPSHVL VRIGPLDSPI LIDPFHDGLP VGDETLDKLL RRSLGPDARI EPEHVAPLPN
RLVLVRLLLN QATRAEQAGD AARAIAIYER IVEVAPSHAQ GWWDLARLQL SDGRGEEARG
SLSAMLEITR DADARATILE ALEALSGR