| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1159 |
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| Symbol | |
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| ID | 5198159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1311072 |
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| End bp | 1311701 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580706 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001261663 |
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| Protein GI | 148554081 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.942847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.660482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACGATCG GAAGGATATT GATCGCGGAC GATCATCCGC TGATCCGCGA AGGCATCCAG
CTTTCCATCC GGGCGCGGCA TCCGGGCCAT GTCGTCGACG TCGCCGGCTC GATCGCCGAG
GCGGAGGCGC TGATCGAGCG CAACGGCGCC TACAAGCTCC TGCTGCTCGA CTATGAGCTG
CCCGACGCCA ACGGCTTCGG GGGCTTCTTC CGTCTCCAGC ACCTGCTCGG CCGTACCCCG
ATCGCGATCA TCTCCGCGCA TGACAGCGAA CAGATGGTGG CGACGACGCA GGCGGTGGGC
GCGTCCGGCT TCCTGTCGAA GCGCCAGCCG CTCGACGCCA CCATCGCCGG CATCGAGATC
ATCCTGGGCG GCGGCCGGGT TTTTCCTGCC TCCGCGGGCC CCGACACCCA TATCGACATG
CTGCGCAAGC GGCTCGACAG CCTTTCGGGC GCCCAGCGGC GCGTCCTCCT GGCGCTGGCG
GGCGGCGACC TCAACAAGCA GATCGCCGCC GATCTCGGCG TTTCGGAAGC GACCATCAAG
GCGCATCTGT CGGCGATCTT CCGCAAATTG GGGGTGACCA ACCGGACCCA GGCGATCCTG
ATGATGCGCC CGCTGTTGCA GCCTTCATGA
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| Protein sequence | MTIGRILIAD DHPLIREGIQ LSIRARHPGH VVDVAGSIAE AEALIERNGA YKLLLLDYEL
PDANGFGGFF RLQHLLGRTP IAIISAHDSE QMVATTQAVG ASGFLSKRQP LDATIAGIEI
ILGGGRVFPA SAGPDTHIDM LRKRLDSLSG AQRRVLLALA GGDLNKQIAA DLGVSEATIK
AHLSAIFRKL GVTNRTQAIL MMRPLLQPS
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