| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1077 |
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| Symbol | |
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| ID | 5199655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1204183 |
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| End bp | 1206753 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580622 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001261581 |
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| Protein GI | 148553999 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.175922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTCATA GGATGGACGG GATCGAACAA GGGACTGCAG GTTCGGGCCT GCGCCCGCAA
CCAAGGGGGG CTGTTCTGGG TGGCATCAAA GATGCTGTAG CGCGGACGTC GCTGTTCGTC
GTGTTGGTTG GCGCCGCGAT GACCATCGCG CCAACCGCGC TCGCCCAGAC CGACGCCCGC
CCGTTCGACA TTCCGGCTCA GCCGCTAGGC GCCGCGTTGA TCGAGTTCTC GCAGCAGTCC
GATGTCCTGA TTTTCTTTTC GCCGGAGGTC GCCCGGGACA AGATGTCCCG CCCGCTGCGC
GGCGCGATCC CGGTCAATGT GGCTATAGCG GCGCTGCTGC GCGGCAGCGG CCTTCGTGCG
GTTCCCAATC CGAAAGGCGG CTATCGGGTC GAGCGTATCG TGCCGGGGCG ATGGAGGGCG
GCCGATCGGT CGCCCGACCG CGAACTAGGC TCTGGCGCGT CGGCCGGCGG CGCATCGGCT
GCCGCACCGG CCGGACCATC CGACATCATC GTCACCGCGC AGAAACGGGC CGAACGGCTG
CAGGATACGC CTGTCCCTGT GACCGCGCTC GACCCGCGCT CGCTGGCCGA GCGCAATCTG
ACGCGCCTCC AGGATTATGC GAGCGAGGTG CCGGGCCTCG GCCTCAATCC CCAGGGCAAC
GGCAAGACCA ACATCGTCAT TCGCGGCATT TCAACCGGCG TGTTCAGCAA TCCGACCGTC
GCGGTGACGA TCGACGATGT TCCTTATGGC AGCAGTGTCG CGCTCGCCGA CGGCCAACTG
GTGCAGCCCG ATCTCGATCC TGCGGATCTC CGGCGCATCG AGATCCTGCG CGGTCCCCAG
GGCACGCTCT ATGGTGCTTC CAGCCTGGGC GGCCTGATCA AATATGTCAC GGCGGATCCG
TCCCTCGATG CGGCGTCGGG GTGGGTCCAG GCGAGTGCCA GCGTGGTTCG CCGGGGCGAG
AGCGGCCATG GCCTGCTCGG CGCCGTCAAC CTGCCGTTGA GCGACGAGGC AGCGCTGCGC
ATCAACGCCT ATTCGCGGCG CACGCCGGGT TTTGTCGATA ATATCCTGAC CGGTCGCAAG
GACGTCAACG GGATCGATGT CGTGGGCGGG CGCGCCGGCC TCTTGTGGGA AGCCGCGCCG
GCGGTGACGG TTCGCCTGGG CATGCTTCAT CAGTCGAGCC GGAGCGACGG CACCGCGCGC
GTGACGACGG ATTATCATCA GCAACCGTTG CTTGGCGATC TGCGGCAAGC GCTGCCGGAG
GGCAGCGGGA GGTATCGCAC ATATAGCACG TTGCTGACGG CCAATATCGA TGTCGCCCTG
GGTTGGAGCG ATCTCAAATC GGTGACCGGC TATGGCCACA ACGTAAATCG CGAGGCCGGT
CTGTTCGCCG CCTTCGGGCC TGACGCCCAG CTCTCGAACC ATATGCGGAC GCGCAAATTC
ACCCAGGAGT TCCGGCTCTC CTCGCCAACC GGCAGGAAGC TCGAATGGCG GATCGGCGGC
TTCTACACCA GGGAGAACAG CCGCAGCTTC CAGCAGATCG ACACGATCAC GCCCGGGACG
GGCGGCTTCG TCTCGAACCT GCTCGTCGCA ATTTTTCCGA CCAGCTATGA GGAGGTCGCC
GCCTTTGGCG ACGTGACCTA TCACCTGTCT CGTCCCTTCA GCGTGCAGGG CGGATTGCGC
TACAGCCGTA ACTGGCAGAC CTACCGCGAG ACCGATACCG GCCCGCTGGG TGACGTCACG
CCCGGGGTAC CGTTCCGGGC ATCGGCCCAG TCGAACGACG ACGCCGTCAC CTTTCTCATC
GTGCCGCGCT ATGAGGTCAG CCGGCACCTG ATGGCTTATG TCCGCTTCGC CTCGGGTTAT
CGCCCCGGTG GACCGAACGG CTCCGCCATC GTGGCGAACC TGCCCGAAAC CTTTGGCGCC
GATACCACGC TCAACTATGA ACTGGGCGTC AAGGGCGACA TGGCCGGGGG CCGCCTCACC
TTCGACCTCT CCGCCTATCA TATCGACTGG CGTAAGGTGC AGGTCCGCAT TTTCGATAGC
GCGACGCAAT TCTCTTATTT CACCAATGGC GGCCGAGCCC GCAGCGACGG TTTCGAGGCA
ATGCTCCAGT ACCGGACGCC ACGCGGGCTG CGCGTGGCGC TCAACGGCAG TTATAATCTG
GCGCGCTATT CGCGGACGCC GCCGGCCGGG ATCGTCGCGG TCAAGGGTGA TCGCTTGCCG
TTTAGTCCGC GGTTCAGCGG CAATGTCTCG GTCGATCGGG ACATGCCGAT CGCCCCCGAC
TGGACGGCGA CGATCGGCGC GACGATCGCC TATGTCGGCG AGCGACAAGG CATGTTCCCG
CAACGCCCCG GCAATCTGCG GATTGCATGG CCGGGCTTCG TGCGGATGGA TCTGCGCGCC
GGCGTCCGTT CGACCAGATG GGCCATCGGC CTGTTCGCGC GCAACGTCAC CGACCGGCGT
GGCGTGCTCT CCTCGACATC GGACACGCCG GCCTCGCTGA CGACCAGCGT CTATGGCACC
AACTTCAATC CACCGCGAAC GTTCGGCCTC TATCTGGAAC GCACCCTCTG A
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| Protein sequence | MRHRMDGIEQ GTAGSGLRPQ PRGAVLGGIK DAVARTSLFV VLVGAAMTIA PTALAQTDAR
PFDIPAQPLG AALIEFSQQS DVLIFFSPEV ARDKMSRPLR GAIPVNVAIA ALLRGSGLRA
VPNPKGGYRV ERIVPGRWRA ADRSPDRELG SGASAGGASA AAPAGPSDII VTAQKRAERL
QDTPVPVTAL DPRSLAERNL TRLQDYASEV PGLGLNPQGN GKTNIVIRGI STGVFSNPTV
AVTIDDVPYG SSVALADGQL VQPDLDPADL RRIEILRGPQ GTLYGASSLG GLIKYVTADP
SLDAASGWVQ ASASVVRRGE SGHGLLGAVN LPLSDEAALR INAYSRRTPG FVDNILTGRK
DVNGIDVVGG RAGLLWEAAP AVTVRLGMLH QSSRSDGTAR VTTDYHQQPL LGDLRQALPE
GSGRYRTYST LLTANIDVAL GWSDLKSVTG YGHNVNREAG LFAAFGPDAQ LSNHMRTRKF
TQEFRLSSPT GRKLEWRIGG FYTRENSRSF QQIDTITPGT GGFVSNLLVA IFPTSYEEVA
AFGDVTYHLS RPFSVQGGLR YSRNWQTYRE TDTGPLGDVT PGVPFRASAQ SNDDAVTFLI
VPRYEVSRHL MAYVRFASGY RPGGPNGSAI VANLPETFGA DTTLNYELGV KGDMAGGRLT
FDLSAYHIDW RKVQVRIFDS ATQFSYFTNG GRARSDGFEA MLQYRTPRGL RVALNGSYNL
ARYSRTPPAG IVAVKGDRLP FSPRFSGNVS VDRDMPIAPD WTATIGATIA YVGERQGMFP
QRPGNLRIAW PGFVRMDLRA GVRSTRWAIG LFARNVTDRR GVLSSTSDTP ASLTTSVYGT
NFNPPRTFGL YLERTL
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