Gene Swit_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1044 
Symbol 
ID5197209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1161847 
End bp1163844 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content70% 
IMG OID640580589 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001261548 
Protein GI148553966 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0849595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCATTCG ACCGCATCCT GAGCCCGATC CTGATCAACG GGCTCGAGAT CAGGAACCGC 
GTCGCCCGCG CCGCGCACGG CACCAGCTAT GGCCGCGGCG CGATCAGCGA CGACCTGATC
GCCTATCATG AGGCGCGCGC GAAGGGCGGG GTCGGGCTGA ACATCCTCGA GGCGACGGTG
GTCCATCCGT CGACCTCGAA CCACACCGTC AACGCGCTCG ACGATTCGAT CATCCCCGGT
TTCGCGAAGC TGGGGGAGGC CTGTTCGCGG CACGGGATGC GGACCTTCGT CCAGCTCTGG
CACGGCGGCC ATCGCTGGGC CCCCGCCAAC GGCCAGGCGC CGCTGTCGGC CTCCGACGTG
CCCTGCCCGC TCGGCGTCAC CAACACGCCG CAGCCGATGA CGCTCGACCA GATCGAGGAG
ATCACCGAGG CCTTCGCCGA CGCCGCCGAG CGGGTCCGCA AGGGCGGGCT CGACGGGATC
GAGCTGCATT GCGGCCACGG CTATCTGGTC CACCAGTTCC TCTGTCCGCT GACCAATCGC
CGCGAGGACG ATCATGGCGG CAGCCTGGAG AACCGGATGC GCTTCATGCA CGGCATCCTC
GGCGCGATCC GCAAGCGGGT GGGCGACGAC TTCCCGCTCG GCATCCGCAT CTCCGACTAC
AACGCCCCCG GCGGCTTCAG CCCCGAGGAG GCCGGCGAGG TCGTCGCGCG GGTCTGCGCC
GACGGGCTGG TCGACTATGT CAGCGGGTCG ATGGGCAGCC CCTACAGCAT CGCGTCGATG
CTCGGCTGCA TGGACCAGCC GTCGGGCTAT ATGCTCCCCT CCGCCGAGCC GATCGTCCAG
CGCGCGACCG TGCCGACGAT GATCGCGGGC CGCTTCGGCA CGCTCGACGA GGGCGAGCAG
GTGATCCGCG CCGGCCTGGC CGACATGGTC AGCTATGTCC GCGCGCTGAT CGCCGACGCC
GATCTGGTCG CCAAGTCGGC GGCCGGCAAC GCGATCGGCG TCCGCCCCTG CATCGGCTGC
AACCAGGGCT GCGTCGGCGG CATCCGCACC CCCGTCCAGC GGATGACCTG CACGGTCAAT
CCGGCGGTCG GCTTCGAGCG GACGATGGAC GAAAGCCTGA TCGCCCCCGC CGAAACCCCG
CGCAAGGTGG TGGTGATCGG CGGCGGCCCG GCCGGCATGG AGGCGGCGCG GATCGCCCGG
CTGCACGGCC ATGAGGTGGT GCTGATGGAG GCGCAGCCGA CCCTCGGCGG CGCGGTCAAC
ATCGCCAGGC ATGCGCCGAA GCTCCAGGCG ATCCACGACA TCACCCTGTG GCAGGAAGCG
GAGGTGTTCC GCCTCGGCGT CGACGTGCGC CTGTCGACCT ATGCCGAGGT CGACGAGGTG
CTGGCCGAGC GGCCCGACGT GGTGATCATC GCCACCGGAT CGCTGCCGCG CATGGACGGT
CTTCAGGCGC AACGGCCCGA GCGGCCGATT CCCGGCTTCC ACCAGCCGCA CGTGCTGTCG
TCCTGGGACC TGCTGCTCGG CCCGGCCGGC GGCCACGGCC GGAGCGCGGT CGTGTTCGAC
GATATCGGCC ATTATGAGGG GATCGCCGCG GCCGAGCATC TGATCGCGCA GGGCGTCGCC
GTCACCTATG TCGCGCGCCA TTCGAGCTTC TCGCCGACGA TGGACATCAT CCTGCGCACC
GGCCCGGCGC TGCGCCGCCT GCGCAAGGGC AGGTTCGACC TGGTGGTGTC GGGGCGGATC
GTCGCGATCG GCCAGGATCG CTGCACGATC GGCTATCTCG ACGGCGACGA GGAGTGGGAG
GTTCCCGCCG ACACCGTCAT ATTCGTCGGC TACAACCAGG CGCAGGCCGA CCTGTGGCGC
GCGCTGGGCG GCGGATCGCG GGCGCCCAAG CCGTATCAAC TGCATCTGAT CGGCGACGCC
AATGCGCCGA GGGACCTGCT GATGGCGATC CGCGAGGGCA ATATGGCGGG GCGTATCGAG
GAGAATGCGG ATGCTTGA
 
Protein sequence
MSFDRILSPI LINGLEIRNR VARAAHGTSY GRGAISDDLI AYHEARAKGG VGLNILEATV 
VHPSTSNHTV NALDDSIIPG FAKLGEACSR HGMRTFVQLW HGGHRWAPAN GQAPLSASDV
PCPLGVTNTP QPMTLDQIEE ITEAFADAAE RVRKGGLDGI ELHCGHGYLV HQFLCPLTNR
REDDHGGSLE NRMRFMHGIL GAIRKRVGDD FPLGIRISDY NAPGGFSPEE AGEVVARVCA
DGLVDYVSGS MGSPYSIASM LGCMDQPSGY MLPSAEPIVQ RATVPTMIAG RFGTLDEGEQ
VIRAGLADMV SYVRALIADA DLVAKSAAGN AIGVRPCIGC NQGCVGGIRT PVQRMTCTVN
PAVGFERTMD ESLIAPAETP RKVVVIGGGP AGMEAARIAR LHGHEVVLME AQPTLGGAVN
IARHAPKLQA IHDITLWQEA EVFRLGVDVR LSTYAEVDEV LAERPDVVII ATGSLPRMDG
LQAQRPERPI PGFHQPHVLS SWDLLLGPAG GHGRSAVVFD DIGHYEGIAA AEHLIAQGVA
VTYVARHSSF SPTMDIILRT GPALRRLRKG RFDLVVSGRI VAIGQDRCTI GYLDGDEEWE
VPADTVIFVG YNQAQADLWR ALGGGSRAPK PYQLHLIGDA NAPRDLLMAI REGNMAGRIE
ENADA