Gene Swit_1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1012 
Symbol 
ID5197378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1127227 
End bp1128021 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID640580558 
Productenoyl-CoA hydratase 
Protein accessionYP_001261517 
Protein GI148553935 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0558214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATA AAAATCCGGA GGTGTTGCGG ATCGAACGGA CCGACGGCGT CGACTGGGTG 
ACGTTGAACC GGCCGGACAG GCTCAACGCG CTCGACGACC GGCTGGTCGC GGCGCTGACC
GACTATGCGC GCGGGCTGCA CGATGCCGAT GCGCCGCGGG TCGTCGTGCT GCGCGGGGCG
GGCCGCGCCT TCTGCGCCGG GCTCGACCTC GATGGGATGC GATCCGGCGA CGCGCTGACC
GCCGACGCGC TGCTGCGCCA GCAGACCGCG ATATCGGGGC TGATCCTGGC GCTGCGCCGC
GCGCCGCAGC CGATCGTCGG CCTGATCCAC GGCGCGGCGT GCGGCGGCGG CTTCGCCCTG
GCGCTGGCGT CGGACATCCG CATCGCCGCG ACCGGCGCGC GGATGAACGC CGCCTTCATC
CGGCTCGGCC TGTCGGGCTG CGACGTCGGC GTCTCCTATC TGCTGCCCCG GCTGGTCGGC
GCGTCGGTCG CGTCCGAACT GCTGTTCACC GGCGACTTCA TCGCCGCCGA CCGCGCGCTC
GCGACCGGGC TCGTGTCGCG CATCGTCGAG GAGGCCGATC TCGTCGCGGC GGCCGAACCC
TTCATCGCCG CGATGCTCGC CGCCTCGCCG ATCGGCCTGC GCATGACCAA GGAATGCCTG
CGCGCCAGCA TCGACGCGCC GAGCCTCGAA AGCGCGATCG CGATGGAGGA CCGCACCCAG
GTGCTGTGCG CGCTCGGCGG CAACCTGGCC GAGGGGATCG CCGCCTTCCG GGAGAAGCGG
CCGGCGCGCT ATTGA
 
Protein sequence
MNDKNPEVLR IERTDGVDWV TLNRPDRLNA LDDRLVAALT DYARGLHDAD APRVVVLRGA 
GRAFCAGLDL DGMRSGDALT ADALLRQQTA ISGLILALRR APQPIVGLIH GAACGGGFAL
ALASDIRIAA TGARMNAAFI RLGLSGCDVG VSYLLPRLVG ASVASELLFT GDFIAADRAL
ATGLVSRIVE EADLVAAAEP FIAAMLAASP IGLRMTKECL RASIDAPSLE SAIAMEDRTQ
VLCALGGNLA EGIAAFREKR PARY